Annotations: 9FO3

Structure of a gp140 SpyTag-SpyCatcher mi3 nanoparticle including mi3 density only.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
ZA [auth z]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
YA [auth y]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
XA [auth x]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
WA [auth w]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
VA [auth v]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
UA [auth u]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
TA [auth t]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
SA [auth s]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
RA [auth r]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
QA [auth q]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
PA [auth p]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
OA [auth o]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
NA [auth n]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
MA [auth m]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
LA [auth l]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
KA [auth k]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
JA [auth j]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
IA [auth i]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
HB [auth 7]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
HA [auth h]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
GB [auth 6]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
GA [auth g]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
FB [auth 5]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
FA [auth f]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
EB [auth 4]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
EA [auth e]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
DB [auth 3]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
DA [auth d]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
CB [auth 2]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
CA [auth c]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
BB [auth 1]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
AB [auth 0]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Aldolase	8033008	3000445	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth z]	Beta-Casp	e9fo3z1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Z	Beta-Casp	e9fo3Z1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
YA [auth y]	Beta-Casp	e9fo3y1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Y	Beta-Casp	e9fo3Y1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
XA [auth x]	Beta-Casp	e9fo3x1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
X	Beta-Casp	e9fo3X1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
WA [auth w]	Beta-Casp	e9fo3w1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
W	Beta-Casp	e9fo3W1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
VA [auth v]	Beta-Casp	e9fo3v1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
V	Beta-Casp	e9fo3V1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
UA [auth u]	Beta-Casp	e9fo3u1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
U	Beta-Casp	e9fo3U1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
TA [auth t]	Beta-Casp	e9fo3t1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
T	Beta-Casp	e9fo3T1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
SA [auth s]	Beta-Casp	e9fo3s1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
S	Beta-Casp	e9fo3S1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
RA [auth r]	Beta-Casp	e9fo3r1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
R	Beta-Casp	e9fo3R1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
QA [auth q]	Beta-Casp	e9fo3q1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
Q	Beta-Casp	e9fo3Q1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
PA [auth p]	Beta-Casp	e9fo3p1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
P	Beta-Casp	e9fo3P1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
OA [auth o]	Beta-Casp	e9fo3o1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
O	Beta-Casp	e9fo3O1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
NA [auth n]	Beta-Casp	e9fo3n1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
N	Beta-Casp	e9fo3N1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
MA [auth m]	Beta-Casp	e9fo3m1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
M	Beta-Casp	e9fo3M1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
LA [auth l]	Beta-Casp	e9fo3l1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
L	Beta-Casp	e9fo3L1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
KA [auth k]	Beta-Casp	e9fo3k1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
K	Beta-Casp	e9fo3K1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
JA [auth j]	Beta-Casp	e9fo3j1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
J	Beta-Casp	e9fo3J1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
IA [auth i]	Beta-Casp	e9fo3i1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
I	Beta-Casp	e9fo3I1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
HB [auth 7]	Beta-Casp	e9fo371	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
HA [auth h]	Beta-Casp	e9fo3h1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
H	Beta-Casp	e9fo3H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
GB [auth 6]	Beta-Casp	e9fo361	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
GA [auth g]	Beta-Casp	e9fo3g1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
G	Beta-Casp	e9fo3G1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
FB [auth 5]	Beta-Casp	e9fo351	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
FA [auth f]	Beta-Casp	e9fo3f1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
F	Beta-Casp	e9fo3F1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
EB [auth 4]	Beta-Casp	e9fo341	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
EA [auth e]	Beta-Casp	e9fo3e1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
E	Beta-Casp	e9fo3E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
DB [auth 3]	Beta-Casp	e9fo331	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
DA [auth d]	Beta-Casp	e9fo3d1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
D	Beta-Casp	e9fo3D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
CB [auth 2]	Beta-Casp	e9fo321	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
CA [auth c]	Beta-Casp	e9fo3c1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
C	Beta-Casp	e9fo3C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
BB [auth 1]	Beta-Casp	e9fo311	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
BA [auth b]	Beta-Casp	e9fo3b1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
B	Beta-Casp	e9fo3B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
AB [auth 0]	Beta-Casp	e9fo301	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
AA [auth a]	Beta-Casp	e9fo3a1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Beta-Casp	ECOD (v294.2)
A		e9fo3A01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	PF01081	KDPG and KHG aldolase (Aldolase)	KDPG and KHG aldolase	This family includes the following members: 4-hydroxy-2-oxoglutarate aldolase (KHG-aldolase) Phospho-2-dehydro-3-deoxygluconate aldolase (KDPG-aldolase)	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	CAP255 gp140 SpyTag-SpyCatcher mi3,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase	2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity lyase activity catalytic activity carbon-carbon lyase activity aldehyde-lyase activity	carbohydrate metabolic process catabolic process oxoacid metabolic process carbohydrate catabolic process aldonic acid catabolic process carboxylic acid metabolic process primary metabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process D-galactonate catabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process carbohydrate metabolic process catabolic process oxoacid metabolic process carbohydrate catabolic process aldonic acid catabolic process carboxylic acid metabolic process primary metabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process D-galactonate catabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process small molecule catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR000887	KDPG/KHG aldolase	Family
A, AA [auth a], AB [auth 0], B, BA [auth b], A, AA [auth a], AB [auth 0], B, BA [auth b], BB [auth 1], C, CA [auth c], CB [auth 2], D, DA [auth d], DB [auth 3], E, EA [auth e], EB [auth 4], F, FA [auth f], FB [auth 5], G, GA [auth g], GB [auth 6], H, HA [auth h], HB [auth 7], I, IA [auth i], J, JA [auth j], K, KA [auth k], L, LA [auth l], M, MA [auth m], N, NA [auth n], O, OA [auth o], P, PA [auth p], Q, QA [auth q], R, RA [auth r], S, SA [auth s], T, TA [auth t], U, UA [auth u], V, VA [auth v], W, WA [auth w], X, XA [auth x], Y, YA [auth y], Z, ZA [auth z]	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily