Cryo-EM structure of neutralizing murine antibody WS.HSV-1.24 in complex with HSV-1 glycoprotein B trimer gB-Ecto.516P.531E
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G [auth L] | TIR | e9dd6L1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: TIR | ECOD (v295.2) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| G [auth L], H [auth M], I [auth N] | Light Chain | IGKV9 | Kappa | glycoprotein b | SAbDab (2026-10-16) |
| D [auth H], E [auth I], F [auth J] | Heavy Chain | IGHV2 | - | glycoprotein b | SAbDab (2026-10-16) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth E], B [auth F], C [auth G] | PF17417 | Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2) | Herpesvirus Glycoprotein B PH-like domain | This domain corresponds to the second PH-like domain in herpesvirus glycoprotein B. | Domain |
| A [auth E], B [auth F], C [auth G] | PF17416 | Herpesvirus Glycoprotein B (Glycoprot_B_PH1) | Herpesvirus Glycoprotein B | This domain has a PH-like fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| G [auth L], H [auth M], I [auth N] | WS.HSV-1.24 light chain | - | - | - |
| D [auth H], E [auth I], F [auth J] | WS.HSV-1.24 heavy chain | - | - | - |
| A [auth E], B [auth F], C [auth G] | Glycoprotein B | - |
|