9D3C | pdb_00009d3c

Gly-,Glu-,(S)-(+)-ketamine bound GluN1a-2B-2D NMDAR

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGal-bind_lectine9d3cA1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Gal-bind_lectinECOD (v295)
CGal-bind_lectine9d3cC1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Gal-bind_lectinECOD (v295)
BGal-bind_lectine9d3cB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Gal-bind_lectinECOD (v295)
DGal-bind_lectine9d3cD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: Gal-bind_lectinECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A, C
PF01094Receptor family ligand binding region (ANF_receptor)Receptor family ligand binding regionThis family includes extracellular ligand binding domains of a wide range of receptors. This family also includes the bacterial amino acid binding proteins of known structure. Domain
A, C
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
PF01094Receptor family ligand binding region (ANF_receptor)Receptor family ligand binding regionThis family includes extracellular ligand binding domains of a wide range of receptors. This family also includes the bacterial amino acid binding proteins of known structure. Domain
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
PF01094Receptor family ligand binding region (ANF_receptor)Receptor family ligand binding regionThis family includes extracellular ligand binding domains of a wide range of receptors. This family also includes the bacterial amino acid binding proteins of known structure. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
Glutamate receptor ionotropic, NMDA 1
Glutamate receptor ionotropic, NMDA 2B
Glutamate receptor ionotropic, NMDA 2D

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C
IPR028082Periplasmic binding protein-like IHomologous Superfamily
A, C
IPR001508Ionotropic glutamate receptor, metazoaFamily
A, C
IPR001828Receptor, ligand binding regionDomain
A, C
IPR001320Ionotropic glutamate receptor, C-terminalDomain
A, C
IPR049873Glutamate [NMDA] receptor subunit 1-like, N-terminal LIVBP-like domainDomain
A, C
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
A, C
IPR015683Ionotropic glutamate receptorFamily
A, C
IPR049872Glutamate [NMDA] receptor subunit 1-like, ligand-binding domainDomain
IPR018884Glutamate [NMDA] receptor, epsilon subunit, C-terminalDomain
IPR028082Periplasmic binding protein-like IHomologous Superfamily
IPR001508Ionotropic glutamate receptor, metazoaFamily
IPR001828Receptor, ligand binding regionDomain
IPR001320Ionotropic glutamate receptor, C-terminalDomain
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
IPR015683Ionotropic glutamate receptorFamily
IPR001320Ionotropic glutamate receptor, C-terminalDomain
IPR028082Periplasmic binding protein-like IHomologous Superfamily
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
IPR015683Ionotropic glutamate receptorFamily
IPR001508Ionotropic glutamate receptor, metazoaFamily
IPR001828Receptor, ligand binding regionDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
:  Q05586
:  Q13224
:  O15399

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM