KSHV glycoprotein B ectodomain, postfusion form
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | WD40 | e9cu4C1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| B | WD40 | e9cu4B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A | Gp138_N | e9cu4A01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Gp138_N | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00606 | Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B) | Herpesvirus Glycoprotein B ectodomain | This domain corresponds to the ectodomain of glycoprotein B according to ECOD. | Domain | |
| PF17417 | Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2) | Herpesvirus Glycoprotein B PH-like domain | This domain corresponds to the second PH-like domain in herpesvirus glycoprotein B. | Domain | |
| PF17416 | Herpesvirus Glycoprotein B (Glycoprot_B_PH1) | Herpesvirus Glycoprotein B | This domain has a PH-like fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000234 | Herpesvirus Glycoprotein B | Family | |
| IPR035381 | Herpesvirus Glycoprotein B, PH-like domain 2 | Domain | |
| IPR035377 | Herpesvirus Glycoprotein B, PH-like domain 1 | Domain | |
| IPR055341 | Herpesvirus glycoprotein B ectodomain C-terminal | Domain | |
| IPR038631 | Herpesvirus Glycoprotein B, PH-like domain 2 superfamily | Homologous Superfamily |














