9B45 | pdb_00009b45

Pseudomonas phage Pa193 baseplate complex and tail fiber

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
V [auth d]	WD40	e9b45d1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
W [auth e]	WD40	e9b45e1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
X [auth f]	WD40	e9b45f1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
ZA [auth g]	ecTbetaR2	e9b45g01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: ecTbetaR2	ECOD (v294.2)
BB [auth i]	WD40	e9b45i1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
AB [auth h]	WD40	e9b45h1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
TA [auth G]	ecTbetaR2	e9b45G01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: ecTbetaR2	ECOD (v294.2)
UA [auth H]	WD40	e9b45H1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
VA [auth I]	WD40	e9b45I1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
WA [auth J]	WD40	e9b45J1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
XA [auth K]	WD40	e9b45K1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
YA [auth L]	WD40	e9b45L1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F]	gp34 helical bundle	-	-	-
P [auth S], Q [auth T], R [auth U]	gp38 Ripcord-1	-	-	-
AA [auth X], Y [auth V], Z [auth W]	gp39 Ripcord-2	-	-	-
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	gp37 Baseplate tube	-	-	-
BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], GA [auth 1]	gp46 Baseplate wedge 2	-	-	-
V [auth d], W [auth e], X [auth f]	gp42 Tail hub	-	-	-
S [auth a], T [auth b], U [auth c]	gp41 Tape measure protein	peptidoglycan lytic transglycosylase activity peptidoglycan muralytic activity lyase activity catalytic activity carbon-oxygen lyase activity, acting on polysaccharides carbon-oxygen lyase activity	glycosaminoglycan metabolic process aminoglycan metabolic process peptidoglycan metabolic process carbohydrate derivative metabolic process metabolic process cellular process macromolecule metabolic process	cellular anatomical structure membrane
G [auth 2], H [auth 3], I [auth 4]	gp47 Tail fiber	-	-	-
AB [auth h], BB [auth i], ZA [auth g]	gp44 Tail tip	-	-	-
TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], YA [auth L]	gp35 Sheath initiator	-	-	-
A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], F [auth o], HA [auth q], IA [auth p], JA [auth r], KA [auth s], LA [auth t], MA [auth u]	gp45-a Baseplate wedge 1	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], J [auth A], K [auth B], L [auth C], M [auth D], N [auth E], O [auth F]	IPR054252	Cyanophage baseplate Pam3 plug gp18	Domain
AA [auth X], Y [auth V], Z [auth W]	IPR054442	E217 Baseplate component gp38-like	Family
NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], NA [auth M], OA [auth N], PA [auth O], QA [auth P], RA [auth Q], SA [auth R]	IPR054440	Tail fiber protein gp32-like	Family
BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], BA [auth v], CA [auth w], DA [auth x], EA [auth y], FA [auth z], GA [auth 1]	IPR021283	Bacteriophage baseplate wedge 1 protein	Family
V [auth d], W [auth e], X [auth f]	IPR054496	Baseplate hub gp41	Family
S [auth a], T [auth b], U [auth c]	IPR000189	Prokaryotic transglycosylase, active site	Active Site
S [auth a], T [auth b], U [auth c]	IPR023346	Lysozyme-like domain superfamily	Homologous Superfamily
S [auth a], T [auth b], U [auth c]	IPR008258	Transglycosylase SLT domain 1	Domain
AB [auth h], BB [auth i], ZA [auth g]	IPR037026	Vgr protein, OB-fold domain superfamily	Homologous Superfamily
AB [auth h], BB [auth i], ZA [auth g]	IPR041599	Phage protein Gp138 N-terminal domain	Domain
TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], TA [auth G], UA [auth H], VA [auth I], WA [auth J], XA [auth K], YA [auth L]	IPR020288	Contractile injection system sheath initiator	Family
A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], A [auth j], B [auth k], C [auth l], D [auth m], E [auth n], F [auth o], HA [auth q], IA [auth p], JA [auth r], KA [auth s], LA [auth t], MA [auth u]	IPR006949	Baseplate protein J-like, barrel domain	Domain

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.