9B36
Open state of kainate receptor GluK2 in complex with agonist glutamate and positive allosteric modulator BPAM344 bound to two concanavalin A dimers. Composite map.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Type 2 solute binding protein-like | 8032346 | 3000083 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Concanavalin A-like lectins/glucanases | 8073922 | 3000120 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00060 | Ligand-gated ion channel (Lig_chan) | Ligand-gated ion channel | - | Family | |
PF01094 | Receptor family ligand binding region (ANF_receptor) | Receptor family ligand binding region | - | Family | |
PF10613 | Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd) | Ligated ion channel L-glutamate- and glycine-binding site | This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ... | Domain | |
PF00139 | Legume lectin domain (Lectin_legB) | Legume lectin domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily | |
IPR001508 | Ionotropic glutamate receptor, metazoa | Family | |
IPR001828 | Receptor, ligand binding region | Domain | |
IPR001320 | Ionotropic glutamate receptor, C-terminal | Domain | |
IPR019594 | Ionotropic glutamate receptor, L-glutamate and glycine-binding domain | Domain | |
IPR015683 | Ionotropic glutamate receptor | Family | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR001220 | Legume lectin domain | Domain | |
IPR000985 | Legume lectin, alpha chain, conserved site | Conserved Site | |
IPR050258 | Leguminous Lectin | Family | |
IPR019825 | Legume lectin, beta chain, Mn/Ca-binding site | Binding Site |