Cryo-EM structure of Cas8-HNH system at ssDNA-bound state
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| K [auth M] | WD40 | e8znrM1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| E | WD40 | e8znrE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| H | WD40 | e8znrH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| G | WD40 | e8znrG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| D | WD40 | e8znrD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| C | WD40 | e8znrC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| B | WD40 | e8znrB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A | WD40 | e8znrA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| K [auth M] | PF09618 | CRISPR-associated protein (Cas_Csy4) (Cas_Csy4) | CRISPR-associated protein (Cas_Csy4) | - | Family |
| PF01844 | HNH endonuclease (HNH) | HNH endonuclease | - | Family | |
| PF09614 | CRISPR-associated protein (Cas_Csy2) (Cas_Csy2) | CRISPR-associated protein (Cas_Csy2) | - | Family | |
| PF09615 | CRISPR-associated protein (Cas_Csy3) (Cas_Csy3) | CRISPR-associated protein (Cas_Csy3) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| K [auth M] | protein structure |
| - | |
| J [auth L] | RNA (56-MER) | - | - | - |
| DNA (35-MER) | - | - | - | |
| protein structure | - | - | ||
| protein structure | - | - | - | |
| protein structure | - | - | - |














