8ZDY | pdb_00008zdy

Cryo-EM structure of Cas8-HNH system at target free state


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IWD40e8zdyI1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
HWD40e8zdyH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
FWD40e8zdyF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
EWD40e8zdyE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
DWD40e8zdyD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
CWD40e8zdyC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
BWD40e8zdyB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
AWD40e8zdyA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09618CRISPR-associated protein (Cas_Csy4) (Cas_Csy4)CRISPR-associated protein (Cas_Csy4)- Family
PF09614CRISPR-associated protein (Cas_Csy2) (Cas_Csy2)CRISPR-associated protein (Cas_Csy2)- Family
PF01844HNH endonuclease (HNH)HNH endonuclease- Family
PF09611CRISPR-associated protein (Cas_Csy1) (Cas_Csy1)CRISPR-associated protein (Cas_Csy1)- Family
A, B, C, D, E
PF09615CRISPR-associated protein (Cas_Csy3) (Cas_Csy3)CRISPR-associated protein (Cas_Csy3)- Family