8Z4V | pdb_00008z4v

LH2 complex from Ectothiorhodospira haloalkaliphila at near-atomic resolution

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P [auth W]	WD40	e8z4vW1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
N [auth T]	WD40	e8z4vT1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
L [auth Q]	WD40	e8z4vQ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
J [auth N]	WD40	e8z4vN1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
H [auth K]	WD40	e8z4vK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
F [auth H]	WD40	e8z4vH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D [auth E]	WD40	e8z4vE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B [auth C]	PabTrmU54_TRAM_dom	e8z4vC01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: PabTrmU54_TRAM_dom	ECOD (v294.2)
O [auth V]	WD40	e8z4vV1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
M [auth S]	WD40	e8z4vS1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
K [auth P]	WD40	e8z4vP1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
I [auth M]	WD40	e8z4vM1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
G [auth J]	WD40	e8z4vJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E [auth G]	WD40	e8z4vG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C [auth D]	WD40	e8z4vD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
A	PabTrmU54_TRAM_dom	e8z4vA01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: PabTrmU54_TRAM_dom	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], L [auth Q], N [auth T], P [auth W]	Light-harvesting protein B-800/850 alpha chain	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	Light-harvesting protein B:800-850 subunit beta	chlorophyll binding binding bacteriochlorophyll binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle plasma membrane light-harvesting complex protein-containing complex intracellular anatomical structure intracellular vesicle plasma membrane-derived chromatophore light-harvesting complex intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], L [auth Q], N [auth T], P [auth W]	IPR000066	Antenna complex, alpha/beta subunit	Domain
B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], L [auth Q], N [auth T], P [auth W]	IPR018332	Antenna complex, alpha subunit	Family
B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], B [auth C], D [auth E], F [auth H], H [auth K], J [auth N], L [auth Q], N [auth T], P [auth W]	IPR035889	Light-harvesting complex	Homologous Superfamily
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	IPR000066	Antenna complex, alpha/beta subunit	Domain
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	IPR023624	Antenna complex, beta domain superfamily	Homologous Superfamily
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	IPR035889	Light-harvesting complex	Homologous Superfamily
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	IPR023623	Antenna complex, beta subunit, conserved site	Conserved Site
A, C [auth D], E [auth G], G [auth J], I [auth M], A, C [auth D], E [auth G], G [auth J], I [auth M], K [auth P], M [auth S], O [auth V]	IPR002362	Light-harvesting protein B beta chain	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.