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8XMS
Crystal structure of Porcine Circovirus type II Rep ATPase domain
External Resource: Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
,
B
,
C
,
D
,
E
A
,
B
,
C
,
D
,
E
,
F
Less
PF00910
RNA helicase (RNA_helicase)
RNA helicase
This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
,
B
,
C
,
D
,
E
A
,
B
,
C
,
D
,
E
,
F
Less
Replication-associated protein
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
DNA binding
nucleic acid binding
pyrophosphatase activity
ATP hydrolysis activity
ribonucleoside triphosphate phosphatase activity
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
hydrolase activity
hydrolase activity, acting on acid anhydrides
catalytic activity
ATP-dependent activity
catalytic activity, acting on RNA
catalytic activity, acting on a nucleic acid
helicase activity
RNA helicase activity
ATP-dependent activity, acting on RNA
endonuclease activity
nuclease activity
hydrolase activity, acting on ester bonds
transferase activity
nucleotidyltransferase activity
transferase activity, transferring phosphorus-containing groups
RNA binding
cation binding
metal ion binding
Less
nucleobase-containing compound metabolic process
DNA replication
metabolic process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
nucleic acid metabolic process
cellular biosynthetic process
cellular metabolic process
viral DNA genome replication
rolling circle single-stranded viral DNA replication
viral life cycle
nucleobase-containing compound biosynthetic process
macromolecule biosynthetic process
nucleobase-containing compound metabolic process
DNA replication
metabolic process
primary metabolic process
DNA metabolic process
macromolecule metabolic process
nucleic acid metabolic process
cellular biosynthetic process
cellular metabolic process
viral DNA genome replication
rolling circle single-stranded viral DNA replication
viral life cycle
nucleobase-containing compound biosynthetic process
macromolecule biosynthetic process
viral DNA strand displacement replication
nucleic acid biosynthetic process
biosynthetic process
viral genome replication
viral process
rolling circle viral DNA replication
cellular process
DNA biosynthetic process
Less
host intracellular membrane-bounded organelle
host cellular component
host intracellular part
host cell part
host intracellular region
cellular anatomical entity
host cell nucleus
host intracellular organelle
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
,
C
,
D
,
E
A
,
B
,
C
,
D
,
E
,
F
Less
IPR049912
CRESS-DNA virus replication initiator protein, endonuclease domain
Domain
A
,
B
,
C
,
D
,
E
A
,
B
,
C
,
D
,
E
,
F
Less
IPR000605
Helicase, superfamily 3, single-stranded DNA/RNA virus
Domain
A
,
B
,
C
,
D
,
E
A
,
B
,
C
,
D
,
E
,
F
Less
IPR027417
P-loop containing nucleoside triphosphate hydrolase
Homologous Superfamily
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