Annotations: 8WXB

Cryo-EM structure of the alpha-carboxysome shell vertex from Prochlorococcus MED4

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
YA [auth x]		e8wxbx1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
Y [auth X]		e8wxbX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
XA [auth w]		e8wxbw1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
X [auth W]		e8wxbW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
WA [auth v]		e8wxbv1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
W [auth V]		e8wxbV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
VA [auth u]		e8wxbu1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
V [auth U]		e8wxbU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
UA [auth t]		e8wxbt1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
U [auth T]		e8wxbT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
TA [auth s]		e8wxbs1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
T [auth S]		e8wxbS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
SA [auth r]		e8wxbr1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
S [auth R]		e8wxbR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
RA [auth q]		e8wxbq1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
R [auth Q]		e8wxbQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
QA [auth p]		e8wxbp1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
Q [auth P]		e8wxbP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
PA [auth o]		e8wxbo1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
P [auth O]		e8wxbO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
OA [auth n]		e8wxbn1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
O [auth N]		e8wxbN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
NA [auth m]		e8wxbm1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
N [auth M]		e8wxbM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
MA [auth l]		e8wxbl1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
M [auth L]		e8wxbL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
LA [auth k]		e8wxbk1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
L [auth K]		e8wxbK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
KA [auth j]		e8wxbj1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
K [auth J]		e8wxbJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
JA [auth i]		e8wxbi1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
J [auth I]		e8wxbI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
IA [auth h]		e8wxbh1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
I [auth H]		e8wxbH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
HA [auth g]		e8wxbg1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
H [auth G]		e8wxbG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
GA [auth f]		e8wxbf1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
G [auth F]		e8wxbF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
FA [auth e]		e8wxbe1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
F [auth E]		e8wxbE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
EA [auth d]		e8wxbd1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
E [auth D]		e8wxbD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
DA [auth c]		e8wxbc1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
D [auth C]		e8wxbC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
CA [auth b]		e8wxbb1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
C [auth B]		e8wxbB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
BA [auth a]		e8wxba1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F:	ECOD (v295)
B [auth A]	Sigma70_r1_1	e8wxbA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Sigma70_r1_1	ECOD (v295)
A [auth 2]	Sigma70_r1_1	e8wxb201	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Sigma70_r1_1	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth Z], Z [auth Y]	Carboxysome assembly protein CsoS2	structural molecule activity structural constituent of carboxysome shell	photosynthesis metabolic process cellular process carbon fixation	intracellular organelle bacterial microcompartment cellular anatomical structure intracellular anatomical structure organelle carboxysome membraneless organelle intracellular membraneless organelle
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	Major carboxysome shell protein CsoS1	structural molecule activity structural constituent of carboxysome shell	photosynthesis metabolic process cellular process carbon fixation	intracellular organelle bacterial microcompartment cellular anatomical structure intracellular anatomical structure organelle carboxysome membraneless organelle intracellular membraneless organelle
A [auth 2]	Carboxysome shell vertex protein CsoS4A	-	photosynthesis metabolic process cellular process carbon fixation	intracellular organelle bacterial microcompartment cellular anatomical structure intracellular anatomical structure organelle carboxysome membraneless organelle intracellular membraneless organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth Z], Z [auth Y]	IPR020990	Carboxysome assembly protein CsoS2/2B	Family
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	IPR020808	Bacterial microcompartments protein, conserved site	Conserved Site
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	IPR000249	Bacterial microcompartment domain	Domain
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	IPR050575	Bacterial microcompartment shell	Family
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	IPR044872	CcmK/CsoS1, bacterial microcompartment domain	Domain
B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], B [auth A], BA [auth a], C [auth B], CA [auth b], D [auth C], DA [auth c], E [auth D], EA [auth d], F [auth E], FA [auth e], G [auth F], GA [auth f], H [auth G], HA [auth g], I [auth H], IA [auth h], J [auth I], JA [auth i], K [auth J], KA [auth j], L [auth K], LA [auth k], M [auth L], MA [auth l], N [auth M], NA [auth m], O [auth N], OA [auth n], P [auth O], PA [auth o], Q [auth P], QA [auth p], R [auth Q], RA [auth q], S [auth R], SA [auth r], T [auth S], TA [auth s], U [auth T], UA [auth t], V [auth U], VA [auth u], W [auth V], WA [auth v], X [auth W], XA [auth w], Y [auth X], YA [auth x]	IPR037233	CcmK-like superfamily	Homologous Superfamily
A [auth 2]	IPR004992	Ethanolamine utilization protein EutN/carboxysome shell vertex protein CcmL	Family
A [auth 2]	IPR036677	EutN/Ccml superfamily	Homologous Superfamily
A [auth 2]	IPR014076	Carboxysome shell vertex protein CsoS4A	Family

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8WXB | pdb_00008wxb

Cryo-EM structure of the alpha-carboxysome shell vertex from Prochlorococcus MED4

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage