8WB4

Structure of PSII-ACPII supercomplex from cryptophyte algae

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth A],
ZA [auth a]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
CA [auth d],
J [auth D]		PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
DA [auth e],
K [auth E]		PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
DA [auth e],
K [auth E]		PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
AB [auth h],
M [auth H]		PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
GA [auth i],
N [auth I]		PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family
EB [auth t],
U [auth T]		PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
OA [auth x],
X		PF06596Photosystem II reaction centre X protein (PsbX) (PsbX)Photosystem II reaction centre X protein (PsbX)- Family
PA [auth y],
Y		PF05969Photosystem II complex subunit Ycf12 (PSII_Ycf12)Photosystem II complex subunit Ycf12- Family
QA [auth z],
Z		PF01737YCF9 (Ycf9)YCF9- Family
BA [auth c],
VA [auth C]		PF00421Photosystem II protein (PSII)Photosystem II protein- Family
JA [auth l],
XA [auth L]		PF02419PsbL protein (PsbL)PsbL protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth m],
B [auth M]		Photosystem II reaction center M-
C [auth 1],
SA [auth 7]		ACPII-1---
D [auth 2],
TA [auth 8]		ACPII-2---
E [auth 3],
UA [auth 9]		ACPII-3---
F [auth 4],
RA [auth 0]		ACPII-4---
BB [auth p],
G [auth 5]		ACPII-5---
H [auth 6],
YA [auth P]		ACPII-6---
I [auth A],
ZA [auth a]		Photosystem II protein D1
CA [auth d],
J [auth D]		Photosystem II D2 protein
DA [auth e],
K [auth E]		Cytochrome b559 subunit alpha
EA [auth f],
L [auth F]		Cytochrome b559 subunit beta
AB [auth h],
M [auth H]		Photosystem II reaction center protein H
GA [auth i],
N [auth I]		Photosystem II reaction center protein I-
HA [auth j],
O [auth J]		Photosystem II reaction center protein J-
IA [auth k],
P [auth K]		Photosystem II reaction center protein K-
KA [auth o],
Q [auth O]		Photosystem II reaction center protein O---
CB [auth q],
R [auth Q]		Photosystem II reaction center protein Q---
LA [auth r],
S [auth R]		Photosystem II reaction center protein R---
DB [auth s],
T [auth S]		CCPII-S---
EB [auth t],
U [auth T]		Photosystem II reaction center protein T-
MA [auth u],
V [auth U]		Photosystem II reaction center protein U---
NA [auth v],
W [auth V]		Photosystem II cytochrome c550
OA [auth x],
X		Photosystem II reaction center X protein-
PA [auth y],
Y		Photosystem II reaction center protein Ycf12-
QA [auth z],
Z		Photosystem II reaction center protein Z-
AA [auth b],
FB [auth B]		Photosystem II CP47 reaction center protein
BA [auth c],
VA [auth C]		Photosystem II CP43 reaction center protein
FA [auth g],
WA [auth G]		Photosystem II reaction center protein G---
JA [auth l],
XA [auth L]		Photosystem II reaction center protein L-
GB [auth w],
HB [auth W]		Photosystem II reaction center protein W---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth m],
B [auth M]		IPR007826Photosystem II PsbMFamily
A [auth m],
B [auth M]		IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
I [auth A],
ZA [auth a]		IPR005867Photosystem II protein D1Family
I [auth A],
ZA [auth a]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
I [auth A],
ZA [auth a]		IPR000484Photosynthetic reaction centre, L/MFamily
CA [auth d],
J [auth D]		IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
CA [auth d],
J [auth D]		IPR000484Photosynthetic reaction centre, L/MFamily
CA [auth d],
J [auth D]		IPR005868Photosystem II D2 proteinFamily
DA [auth e],
K [auth E]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
DA [auth e],
K [auth E]		IPR006217Photosystem II cytochrome b559, alpha subunitFamily
DA [auth e],
K [auth E]		IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
DA [auth e],
K [auth E]		IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
DA [auth e],
K [auth E]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
EA [auth f],
L [auth F]		IPR006241Photosystem II cytochrome b559, beta subunitFamily
EA [auth f],
L [auth F]		IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth f],
L [auth F]		IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
AB [auth h],
M [auth H]		IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
AB [auth h],
M [auth H]		IPR001056Photosystem II reaction centre protein HFamily
GA [auth i],
N [auth I]		IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
GA [auth i],
N [auth I]		IPR003686Photosystem II PsbIFamily
HA [auth j],
O [auth J]		IPR002682Photosystem II PsbJFamily
HA [auth j],
O [auth J]		IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
IA [auth k],
P [auth K]		IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
IA [auth k],
P [auth K]		IPR003687Photosystem II PsbKFamily
EB [auth t],
U [auth T]		IPR001743Photosystem II PsbTFamily
EB [auth t],
U [auth T]		IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
NA [auth v],
W [auth V]		IPR017851Photosystem II extrinsic protein V, cytochrome c-550 precursorFamily
NA [auth v],
W [auth V]		IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
NA [auth v],
W [auth V]		IPR009056Cytochrome c-like domainDomain
NA [auth v],
W [auth V]		IPR016003Photosystem II extrinsic protein V, cytochrome c-550 precursor-likeFamily
NA [auth v],
W [auth V]		IPR029490Cytochrome c-550 domainDomain
OA [auth x],
X		IPR009518Photosystem II PsbXFamily
OA [auth x],
X		IPR023431Photosystem II PsbX, type 1 subfamilyFamily
PA [auth y],
Y		IPR010284Photosystem II reaction center protein Ycf12Family
QA [auth z],
Z		IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
QA [auth z],
Z		IPR002644Photosystem II PsbZ, reaction centreFamily
AA [auth b],
FB [auth B]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
AA [auth b],
FB [auth B]		IPR000932Photosystem antenna protein-likeFamily
AA [auth b],
FB [auth B]		IPR017486Photosystem II CP47 reaction centre proteinFamily
BA [auth c],
VA [auth C]		IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
BA [auth c],
VA [auth C]		IPR000932Photosystem antenna protein-likeFamily
BA [auth c],
VA [auth C]		IPR005869Photosystem II CP43 reaction centre proteinFamily
BA [auth c],
VA [auth C]		IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
JA [auth l],
XA [auth L]		IPR003372Photosystem II PsbLFamily
JA [auth l],
XA [auth L]		IPR037266Photosystem II PsbL superfamilyHomologous Superfamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM