8UGP

In-situ structure of typeA supercomplex in respiratory chain ( local refined map focused on CI iron-sulfur cluster regions )


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth 1D]PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
B [auth 1B]PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
E [auth 1G]PF22151NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain (NDSU1_4Fe-4S)NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domainThis entry represents the 4Fe-4S domain of NADH-ubiquinone oxidoreductase NDUFS1 from mammals and NuoG from bacteria, which are part of respiratory chain complex I [1-5].Domain
G [auth 1I]PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth 1D]NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial -
A [auth 1A]NADH-ubiquinone oxidoreductase chain 3
J [auth 1R]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial- -
K [auth 1W]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6- -
L [auth 1q]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12- -
B [auth 1B]NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial -
C [auth 1C]NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial
E [auth 1G]NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
F [auth 1H]NADH-ubiquinone oxidoreductase chain 1 -
G [auth 1I]NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial -
H [auth 1P]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial
I [auth 1Q]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth 1D]IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
D [auth 1D]IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
D [auth 1D]IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
D [auth 1D]IPR001135NADH-quinone oxidoreductase, subunit DDomain
A [auth 1A]IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
A [auth 1A]IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
J [auth 1R]IPR019401Zinc finger, CHCC-typeDomain
J [auth 1R]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
K [auth 1W]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
K [auth 1W]IPR008011Complex 1 LYR protein domainDomain
K [auth 1W]IPR045299NDUFA6, LYR domainDomain
L [auth 1q]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
B [auth 1B]IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
B [auth 1B]IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
C [auth 1C]IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
C [auth 1C]IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
C [auth 1C]IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
C [auth 1C]IPR010218NADH dehydrogenase, subunit CFamily
E [auth 1G]IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
E [auth 1G]IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
E [auth 1G]IPR006656Molybdopterin oxidoreductaseDomain
E [auth 1G]IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
E [auth 1G]IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
E [auth 1G]IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
E [auth 1G]IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
E [auth 1G]IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
F [auth 1H]IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
F [auth 1H]IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
G [auth 1I]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
G [auth 1I]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
G [auth 1I]IPR010226NADH-quinone oxidoreductase, chain IFamily
H [auth 1P]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
H [auth 1P]IPR001509NAD-dependent epimerase/dehydrataseDomain
I [auth 1Q]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
I [auth 1Q]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily