Crystal structure of N-acetylneuraminate lyase (NanA) from Klebsiella aerogenes (pyruvate bound, Orthorhombic P form)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Fe8u92F1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.2)
Ee8u92E1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.2)
De8u92D1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.2)
Ce8u92C1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.2)
Be8u92B1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF:ECOD (v294.2)
AHCO3_cotranspe8u92A1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: HCO3_cotranspECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00701Dihydrodipicolinate synthetase family (DHDPS)Dihydrodipicolinate synthetase familyThis family has a TIM barrel structure. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR005264N-acetylneuraminate lyaseFamily
A, B, C, D, E
IPR020624Schiff base-forming aldolase, conserved siteConserved Site
A, B, C, D, E
IPR013785Aldolase-type TIM barrelHomologous Superfamily
A, B, C, D, E
IPR020625Schiff base-forming aldolase, active siteActive Site
A, B, C, D, E
IPR002220DapA-likeFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D, E
KPI Parent Component: LYS

AA0287

:  N6-pyruvic acid 2-iminyl-L-lysine MOD:00292