Annotations: 8TOO

Crystal structure of Epstein-Barr virus gp42 in complex with antibody 4C12

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
SAbDab Antibody Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	C-type lectin-like	8040257	3001261	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	C-type lectin-like	8040257	3001261	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	C-type lectin-like	8040257	3001261	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	C-type lectin-like	8040257	3001261	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	CoV_NSP10	e8tooL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
K	CoV_NSP10	e8tooK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
J	CoV_NSP10	e8tooJ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
I		e8tooI01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)
H	CoV_NSP10	e8tooH1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
G	CoV_NSP10	e8tooG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
D	CoV_NSP10	e8tooD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
B		e8tooB01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)
F	CoV_NSP10	e8tooF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
E	CoV_NSP10	e8tooE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
C	CoV_NSP10	e8tooC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CoV_NSP10	ECOD (v295.2)
A		e8tooA01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
B, D, G, H	Heavy Chain	IGHV1	-	glycoprotein 42	SAbDab (2026-08-21)
A, C, E, F	Light Chain	IGKV10	Kappa	glycoprotein 42	SAbDab (2026-08-21)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I, J, K, L	Glycoprotein 42	binding carbohydrate binding	-	host cellular component cellular anatomical structure host cell part host cell membrane other organism part virion component virion membrane
B, D, G, H	4C12 heavy chain	-	-	-
A, C, E, F	4C12 light chain	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I, J, K, L	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
I, J, K, L	IPR016187	C-type lectin fold	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.