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8TH9
Structure of mammalian NEIL2 from Monodelphis domestica in complex with THF-containing DNA
External Resource: Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF06831
Formamidopyrimidine-DNA glycosylase H2TH domain (H2TH)
Formamidopyrimidine-DNA glycosylase H2TH domain
Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA repair enzyme that excises oxidised purines from damaged DNA. This family is the central domain containing the DNA-binding helix-two turn-helix domain [1].
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
DNA-(apurinic or apyrimidinic site) lyase
cytoskeletal protein binding
microtubule binding
protein binding
binding
tubulin binding
DNA-(apurinic or apyrimidinic site) endonuclease activity
catalytic activity, acting on DNA
catalytic activity, acting on a nucleic acid
class I DNA-(apurinic or apyrimidinic site) endonuclease activity
lyase activity
catalytic activity
carbon-oxygen lyase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity
cytoskeletal protein binding
microtubule binding
protein binding
binding
tubulin binding
DNA-(apurinic or apyrimidinic site) endonuclease activity
catalytic activity, acting on DNA
catalytic activity, acting on a nucleic acid
class I DNA-(apurinic or apyrimidinic site) endonuclease activity
lyase activity
catalytic activity
carbon-oxygen lyase activity
hydrolase activity, acting on glycosyl bonds
hydrolase activity
DNA N-glycosylase activity
hydrolase activity, hydrolyzing N-glycosyl compounds
cation binding
transition metal ion binding
zinc ion binding
ion binding
metal ion binding
small molecule binding
DNA binding
organic cyclic compound binding
damaged DNA binding
nucleic acid binding
Less
cellular response to stimulus
response to stimulus
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
base-excision repair
cellular response to stress
DNA damage response
response to stress
metabolic process
cellular process
macromolecule metabolic process
DNA repair
intracellular anatomical structure
cytoplasm
cellular anatomical entity
intracellular organelle
mitotic spindle
cytoskeleton
spindle
organelle
intracellular non-membrane-bounded organelle
microtubule cytoskeleton
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
membrane-enclosed lumen
intracellular anatomical structure
cytoplasm
cellular anatomical entity
intracellular organelle
mitotic spindle
cytoskeleton
spindle
organelle
intracellular non-membrane-bounded organelle
microtubule cytoskeleton
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
membrane-enclosed lumen
intracellular membrane-bounded organelle
intracellular organelle lumen
nucleoplasm
organelle lumen
nuclear lumen
Less
B [auth C]
DNA (5'-D(*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*G)-3')
-
-
-
C [auth D]
DNA (5'-D(*GP*CP*GP*TP*CP*CP*AP*(3DR)P*GP*TP*CP*TP*AP*C)-3')
-
-
-
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR012319
Formamidopyrimidine-DNA glycosylase, catalytic domain
Domain
A
IPR015886
DNA glycosylase/AP lyase, H2TH DNA-binding
Domain
A
IPR010979
Small ribosomal subunit protein uS13-like, H2TH
Homologous Superfamily
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