8TFH
Ricin in complex with Fab JB4
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribosome inactivating proteins (RIP) | 8041968 | 3001164 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Ricin B-like lectins | 8042019 | 3000678 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | Ricin B-like lectins | 8042020 | 3000678 | SCOP2B (2021-05-27) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H] | Heavy Chain | IGHV1 | - | ricin b chain | SAbDab (2024-07-12) |
D [auth L] | Light Chain | IGKV19 | Kappa | ricin b chain | SAbDab (2024-07-12) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00161 | Ribosome inactivating protein (RIP) | Ribosome inactivating protein | - | Domain | |
PF00652 | Ricin-type beta-trefoil lectin domain (Ricin_B_lectin) | Ricin-type beta-trefoil lectin domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016139 | Ribosome-inactivating protein, subdomain 2 | Homologous Superfamily | |
IPR016138 | Ribosome-inactivating protein, subdomain 1 | Homologous Superfamily | |
IPR001574 | Ribosome-inactivating protein | Family | |
IPR036041 | Ribosome-inactivating protein superfamily | Homologous Superfamily | |
IPR017988 | Ribosome-inactivating protein conserved site | Conserved Site | |
IPR017989 | Ribosome-inactivating protein type 1/2 | Family | |
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR000772 | Ricin B, lectin domain | Domain | |
IPR016139 | Ribosome-inactivating protein, subdomain 2 | Homologous Superfamily | |
IPR016138 | Ribosome-inactivating protein, subdomain 1 | Homologous Superfamily | |
IPR001574 | Ribosome-inactivating protein | Family | |
IPR036041 | Ribosome-inactivating protein superfamily | Homologous Superfamily | |
IPR017988 | Ribosome-inactivating protein conserved site | Conserved Site | |
IPR017989 | Ribosome-inactivating protein type 1/2 | Family | |
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR000772 | Ricin B, lectin domain | Domain |