8QBN

Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to YPEL5

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 7], B [auth W]	PF17814	LisH-like dimerisation domain (LisH_TPL)	LisH-like dimerisation domain	TOPLESS (TPL) proteins have a highly conserved N-terminal domain containing a lissencephaly homologous (LisH) dimerization motif [1].	Domain
A [auth 7], B [auth W]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
C [auth Y]	PF03226	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly (Yippee-Mis18)	Yippee zinc-binding/DNA-binding /Mis18, centromere assembly	This family includes both Yippee-type proteins and Mis18 kinetochore proteins. Yippee are putative zinc-binding/DNA-binding proteins. Mis18 are proteins involved in the priming of centromeres for recruiting CENP-A. Mis18-alpha and beta form part of ...	This family includes both Yippee-type proteins and Mis18 kinetochore proteins. Yippee are putative zinc-binding/DNA-binding proteins. Mis18 are proteins involved in the priming of centromeres for recruiting CENP-A. Mis18-alpha and beta form part of a small complex with Mis18-binding protein. Mis18-alpha is found to interact with DNA de-methylases through a Leu-rich region located at its carboxyl terminus [5]. This entry also includes the CULT domain proteins such as Cereblon [6].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 7], B [auth W]	WD repeat-containing protein 26	-	organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process catabolic process proteolysis involved in protein catabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process metabolic process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosol GID complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle cytosol GID complex protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
C [auth Y]	Protein yippee-like 5	cation binding ion binding binding metal ion binding small molecule binding	cell population proliferation cellular process	midbody cellular anatomical entity membrane-bounded organelle intracellular anatomical structure tertiary granule lumen membrane-enclosed lumen intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen tertiary granule intracellular organelle organelle lumen cytoplasmic vesicle midbody cellular anatomical entity membrane-bounded organelle intracellular anatomical structure tertiary granule lumen membrane-enclosed lumen intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen tertiary granule intracellular organelle organelle lumen cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle extracellular region centrosome microtubule organizing center cytoskeleton intracellular non-membrane-bounded organelle microtubule cytoskeleton non-membrane-bounded organelle mitotic spindle spindle mitotic spindle pole spindle pole ficolin-1-rich granule ficolin-1-rich granule lumen protein-containing complex ubiquitin ligase complex catalytic complex transferase complex intracellular protein-containing complex nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 7], B [auth W]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth 7], B [auth W]	IPR006595	CTLH, C-terminal LisH motif	Domain
A [auth 7], B [auth W]	IPR001680	WD40 repeat	Repeat
A [auth 7], B [auth W]	IPR006594	LIS1 homology motif	Conserved Site
A [auth 7], B [auth W]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C [auth Y]	IPR034751	Yippee domain	Domain
C [auth Y]	IPR004910	Yippee/Mis18/Cereblon	Domain
C [auth Y]	IPR039058	Yippee family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth 7], B [auth W]	Pharos: Q9H7D7	Skraban-Deardorff syndrome chromosome 1q41-q42 deletion syndrome intellectual disability Pick disease esophageal adenocarcinoma ovarian cancer plasma cell myeloma spina bifida glioblastoma pancreatic intraductal papillary-mucinous carcinoma progressive supranuclear palsy subependymal giant cell astrocytoma
C [auth Y]	Pharos: P62699	astrocytic tumor dermatomyositis lung cancer ovarian cancer peripheral neuropathy spina bifida atypical teratoid rhabdoid tumor glioblastoma malignant glioma pancreatic ductal adenocarcinoma primary biliary cholangitis systemic lupus erythematosus breast cancer large cell medulloblastoma malignant pancreatic neoplasm astrocytic tumor dermatomyositis lung cancer ovarian cancer peripheral neuropathy spina bifida atypical teratoid rhabdoid tumor glioblastoma malignant glioma pancreatic ductal adenocarcinoma primary biliary cholangitis systemic lupus erythematosus breast cancer large cell medulloblastoma malignant pancreatic neoplasm peripheral nervous system disease rheumatoid arthritis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.