Annotations: 8QAT

Cryo-EM structure of Fts-Hook3-FHIP1B at 3.2 A resolution.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Helicase_C	e8qatD01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Helicase_C	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C	PF10257	Retinoic acid induced 16-like protein (RAI16-like)	Retinoic acid induced 16-like protein	-	Repeat
C	PF19311	KELAA motif (KELAA)	KELAA motif	-	Motif
C	PF19314	Family of unknown function (DUF5917) (DUF5917)	Family of unknown function (DUF5917)	-	Family
D	PF00179	Ubiquitin-conjugating enzyme (UQ_con)	Ubiquitin-conjugating enzyme	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Protein Hook homolog 3	cytoskeletal protein binding microtubule binding protein binding binding tubulin binding dynein light chain binding dynein light intermediate chain binding dynactin binding dynein intermediate chain binding identical protein binding	cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport protein localization to microtubule cytoskeleton protein localization to cytoskeleton cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport protein localization to microtubule cytoskeleton protein localization to cytoskeleton protein localization to organelle macromolecule localization protein localization to microtubule organizing center intracellular protein localization protein localization to centrosome establishment of protein localization protein transport cellular component organization lysosome organization organelle organization vacuole organization lytic vacuole organization cellular component organization or biogenesis cytoskeleton-dependent intracellular transport microtubule cytoskeleton organization microtubule-based process cytoplasmic microtubule organization supramolecular fiber organization cytoskeleton organization Golgi localization organelle localization multicellular organismal process regulation of cellular process regulation of developmental process cellular developmental process negative regulation of biological process cell development regulation of cell differentiation regulation of neurogenesis regulation of cell development regulation of nervous system development negative regulation of neurogenesis multicellular organism development neurogenesis cell differentiation anatomical structure development negative regulation of cellular process negative regulation of nervous system development regulation of multicellular organismal process negative regulation of cell differentiation system development developmental process regulation of multicellular organismal development regulation of biological process negative regulation of developmental process biological regulation nervous system development negative regulation of cell development negative regulation of multicellular organismal process establishment of organelle localization forebrain development nuclear migration cell proliferation in forebrain head development cell population proliferation animal organ development brain development nucleus localization interkinetic nuclear migration central nervous system development neural precursor cell proliferation endosomal transport vesicle-mediated transport between endosomal compartments early endosome to late endosome transport microtubule anchoring at microtubule organizing center microtubule anchoring at centrosome microtubule anchoring neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance vesicle organization endosome organization endomembrane system organization protein localization to perinuclear region of cytoplasm	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure Golgi apparatus cis-Golgi network organelle intracellular membrane-bounded organelle cytoplasm endomembrane system centrosome microtubule organizing center cytoskeleton membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure Golgi apparatus cis-Golgi network organelle intracellular membrane-bounded organelle cytoplasm endomembrane system centrosome microtubule organizing center cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton centriolar satellite FHF complex protein-containing complex pericentriolar material polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
C	FHF complex subunit HOOK-interacting protein 1B	-	cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport endosomal transport vesicle-mediated transport between endosomal compartments cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport endosomal transport vesicle-mediated transport between endosomal compartments early endosome to late endosome transport cellular component organization lysosome organization organelle organization vacuole organization lytic vacuole organization cellular component organization or biogenesis vesicle organization endosome organization endomembrane system organization macromolecule localization protein localization to perinuclear region of cytoplasm intracellular protein localization establishment of protein localization protein transport	FHF complex protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm
D	AKT-interacting protein	ubiquitin conjugating enzyme activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein conjugating enzyme activity transferase activity catalytic activity ubiquitin-protein transferase activity	cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport protein polyubiquitination primary metabolic process cellular localization transport endosome to lysosome transport intracellular transport lysosomal transport establishment of localization vesicle-mediated transport localization intercellular transport establishment of localization in cell cellular process vacuolar transport protein polyubiquitination primary metabolic process protein K63-linked ubiquitination protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal cellular response to stimulus response to stimulus DNA metabolic process DNA damage tolerance nucleic acid metabolic process nucleobase-containing compound metabolic process DNA replication cellular response to stress DNA damage response response to stress establishment of protein localization protein transport macromolecule localization intracellular protein localization apoptotic process cell death programmed cell death regulation of cellular process positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process positive regulation of protein phosphorylation phosphorus metabolic process positive regulation of cellular process regulation of biological process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process biological regulation regulation of macromolecule metabolic process regulation of phosphorus metabolic process regulation of phosphorylation regulation of metabolic process endosomal transport vesicle-mediated transport between endosomal compartments early endosome to late endosome transport regulation of protein binding positive regulation of molecular function regulation of molecular function positive regulation of protein binding regulation of binding positive regulation of binding cellular component organization lysosome organization organelle organization vacuole organization lytic vacuole organization cellular component organization or biogenesis vesicle organization endosome organization endomembrane system organization protein localization to perinuclear region of cytoplasm	FHF complex protein-containing complex cellular anatomical structure intracellular anatomical structure cytoplasm cell periphery plasma membrane membrane membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001715	Calponin homology domain	Domain
A, B	IPR008636	Hook, C-terminal	Domain
A, B	IPR043936	HOOK, N-terminal	Domain
A, B	IPR036872	CH domain superfamily	Homologous Superfamily
C	IPR045668	FHF complex subunit HOOK-interacting protein, KELAA motif	Conserved Site
C	IPR019384	FHF complex subunit HOOK interacting protein	Family
C	IPR045669	FHF complex subunit HOOK-interacting protein, C-terminal	Domain
D	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
D	IPR000608	Ubiquitin-conjugating (UBC), catalytic core domain	Domain
D	IPR050113	Ubiquitin-conjugating enzyme E2-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q86VS8	polycystic ovary syndrome amyotrophic lateral sclerosis multiple sclerosis pancreatic ductal adenocarcinoma Sjogren syndrome breast cancer myopathy pancreatic intraductal papillary-mucinous neoplasm rheumatoid arthritis spina bifida Malignant neoplasm of breast ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis
C	: Q8N612	osteosarcoma ovarian cancer Pick disease
D	: Q9H8T0	Liver Cirrhosis, Experimental esophageal adenocarcinoma ovarian cancer subependymal giant cell astrocytoma glioblastoma malignant glioma primitive neuroectodermal tumor large cell medulloblastoma medulloblastoma spina bifida

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