8OZD

cryoEM structure of SPARTA complex dimer-3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BF_UNCLASSIFIEDe8ozdB2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8ozdB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
H [auth D]F_UNCLASSIFIEDe8ozdD2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
H [auth D]F_UNCLASSIFIEDe8ozdD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
G [auth C]		PF13676TIR domain (TIR_2)TIR domainThis is a family of Toll-like receptors.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
G [auth C]		TIR domain-containing protein- -
B,
H [auth D]		Piwi domain-containing protein - -
C [auth I],
D [auth F]		RNA (18-MER)---
E [auth J],
F [auth E]		DNA (16-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
G [auth C]		IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
A,
G [auth C]		IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily
B,
H [auth D]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
B,
H [auth D]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily