Annotations: 8OR5

Solution NMR structure of Notch1 TMD

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Notch 1 extracellular truncation	molecular transducer activity transmembrane signaling receptor activity signaling receptor activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding DNA binding chromatin binding nucleic acid binding chromatin DNA binding protein binding molecular transducer activity transmembrane signaling receptor activity signaling receptor activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding DNA binding chromatin binding nucleic acid binding chromatin DNA binding protein binding signaling receptor binding Notch binding identical protein binding molecular function activator activity molecular function regulator activity transcription regulator activator activity enzyme regulator activity molecular function inhibitor activity enzyme inhibitor activity transcription coactivator activity transcription regulator activity transcription coregulator activity enzyme binding	developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development animal gross anatomical part developmental process circulatory system development system development cardiac chamber morphogenesis heart morphogenesis ventricular septum development anatomical structure morphogenesis cardiac septum development developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development animal gross anatomical part developmental process circulatory system development system development cardiac chamber morphogenesis heart morphogenesis ventricular septum development anatomical structure morphogenesis cardiac septum development cardiac septum morphogenesis ventricular septum morphogenesis cardiac chamber development animal organ morphogenesis cardiac ventricle development regulation of biological process regulation of cellular process regulation of cell adhesion biological regulation negative regulation of biological process negative regulation of cell adhesion cell adhesion cell-cell adhesion negative regulation of cell-cell adhesion mediated by cadherin cell-cell adhesion mediated by cadherin negative regulation of cell-cell adhesion negative regulation of cellular process regulation of cell-cell adhesion cellular process regulation of cell-cell adhesion mediated by cadherin cellular developmental process regulation of developmental process cell development regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis negative regulation of glial cell proliferation regulation of cell development regulation of nervous system development neurogenesis negative regulation of neurogenesis regulation of glial cell proliferation gliogenesis cell differentiation regulation of multicellular organismal process negative regulation of nervous system development negative regulation of cell differentiation regulation of multicellular organismal development negative regulation of cell population proliferation cell population proliferation negative regulation of developmental process nervous system development negative regulation of gliogenesis negative regulation of cell development regulation of cell population proliferation glial cell proliferation negative regulation of multicellular organismal process negative regulation of stem cell differentiation stem cell differentiation regulation of stem cell differentiation tissue regeneration developmental growth growth regeneration negative regulation of programmed cell death regulation of apoptotic process regulation of anoikis regulation of programmed cell death cell death negative regulation of anoikis negative regulation of apoptotic process anoikis apoptotic process programmed cell death catabolic process metabolic process primary metabolic process protein catabolic process protein metabolic process macromolecule metabolic process macromolecule catabolic process cardiac atrium morphogenesis cardiac right atrium morphogenesis cardiac atrium development cardioblast proliferation regulation of cardioblast proliferation animal organ formation heart formation cell proliferation involved in heart morphogenesis anatomical structure formation involved in morphogenesis regulation of cell proliferation involved in heart morphogenesis cellular response to stimulus response to stimulus cell surface receptor signaling pathway signaling cellular response to interleukin-17 response to interleukin-17 response to cytokine cytokine-mediated signaling pathway cell communication response to peptide interleukin-17-mediated signaling pathway response to chemical cellular response to cytokine stimulus signal transduction mesenchyme development tissue development mesenchymal cell development mesenchymal cell differentiation cell adhesion involved in heart morphogenesis regulation of cell adhesion involved in heart morphogenesis RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process cellular response to gonadotropin stimulus response to endogenous stimulus response to gonadotropin cellular response to endogenous stimulus cellular response to chemical stimulus response to hormone cellular response to follicle-stimulating hormone stimulus response to follicle-stimulating hormone cellular response to hormone stimulus endothelium development positive regulation of biological process epithelial cell differentiation regulation of epithelial cell differentiation positive regulation of developmental process positive regulation of cell differentiation positive regulation of endothelial cell differentiation positive regulation of cellular process epithelium development endothelial cell differentiation regulation of endothelial cell differentiation positive regulation of epithelial cell differentiation negative regulation of locomotion regulation of cell motility cell migration involved in sprouting angiogenesis regulation of blood vessel endothelial cell migration endothelial cell migration angiogenesis negative regulation of endothelial cell migration negative regulation of blood vessel endothelial cell migration tube morphogenesis regulation of cell migration regulation of endothelial cell migration blood vessel endothelial cell migration cell migration cell motility locomotion negative regulation of cell migration blood vessel development blood vessel morphogenesis tube development regulation of cell migration involved in sprouting angiogenesis sprouting angiogenesis vasculature development regulation of locomotion negative regulation of cell motility negative regulation of cell migration involved in sprouting angiogenesis negative regulation of cardiac muscle cell apoptotic process muscle cell apoptotic process regulation of cardiac muscle cell apoptotic process regulation of muscle cell apoptotic process cardiac muscle cell apoptotic process regulation of striated muscle cell apoptotic process striated muscle cell apoptotic process negative regulation of muscle cell apoptotic process negative regulation of striated muscle cell apoptotic process smooth muscle cell differentiation cardiac vascular smooth muscle cell development muscle cell differentiation muscle structure development vascular associated smooth muscle cell differentiation muscle cell development vascular associated smooth muscle cell development cardiac cell development cardiac vascular smooth muscle cell differentiation coronary vasculature development cardiocyte differentiation heart growth organ growth developmental growth involved in morphogenesis growth involved in heart morphogenesis negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process positive regulation of smooth muscle cell differentiation regulation of smooth muscle cell differentiation positive regulation of muscle cell differentiation regulation of muscle cell differentiation Notch signaling pathway blood vessel endothelial cell differentiation arterial endothelial cell differentiation endocardial cushion morphogenesis endocardial cushion development cardiac epithelial to mesenchymal transition epithelial to mesenchymal transition involved in endocardial cushion formation mesenchyme morphogenesis epithelial to mesenchymal transition endocardial cushion formation tissue morphogenesis neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance ventricular cardiac muscle tissue morphogenesis striated muscle tissue development ventricular cardiac muscle tissue development ventricular trabecula myocardium morphogenesis muscle tissue development muscle organ development cardiac muscle tissue development muscle tissue morphogenesis cardiac ventricle morphogenesis cardiac muscle tissue morphogenesis heart trabecula morphogenesis trabecula morphogenesis muscle organ morphogenesis regulation of glial cell differentiation negative regulation of oligodendrocyte differentiation negative regulation of glial cell differentiation central nervous system development oligodendrocyte differentiation glial cell differentiation regulation of oligodendrocyte differentiation positive regulation of cell communication positive regulation of signal transduction regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette regulation of signaling positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of signaling immune response immune system process vasculogenesis vasculogenesis involved in coronary vascular morphogenesis coronary vasculature morphogenesis atrioventricular valve development heart valve development mitral valve morphogenesis atrioventricular valve formation heart valve morphogenesis mitral valve development mitral valve formation heart valve formation atrioventricular valve morphogenesis coronary sinus valve morphogenesis coronary sinus valve development left/right axis specification pattern specification process left/right pattern formation axis specification regionalization regulation of cellular component organization extracellular matrix organization regulation of cellular component biogenesis cellular component organization cellular component biogenesis cellular component assembly regulation of extracellular matrix assembly cellular component organization or biogenesis regulation of extracellular matrix organization extracellular matrix assembly extracellular structure organization external encapsulating structure organization endocardium development endocardium morphogenesis regulation of cell adhesion molecule production negative regulation of cell adhesion molecule production cell adhesion molecule production negative regulation of muscle cell differentiation regulation of striated muscle cell differentiation myotube differentiation negative regulation of myotube differentiation regulation of myotube differentiation negative regulation of striated muscle cell differentiation striated muscle cell differentiation regulation of epithelial to mesenchymal transition positive regulation of cardiac epithelial to mesenchymal transition positive regulation of epithelial to mesenchymal transition regulation of cardiac epithelial to mesenchymal transition positive regulation of multicellular organismal process cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway positive regulation of BMP signaling pathway BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway regulation of cellular response to growth factor stimulus positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor venous endothelial cell differentiation positive regulation of cell population proliferation aortic valve development semi-lunar valve development aortic valve morphogenesis axonogenesis cell projection organization plasma membrane bounded cell projection morphogenesis neuron projection development cell morphogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis plasma membrane bounded cell projection organization axon guidance axon development cell morphogenesis involved in neuron differentiation generation of neurons neuron projection guidance neuron development positive regulation of locomotion positive regulation of cell migration positive regulation of cell motility rhythmic process ovulation cycle process gonad development reproductive system development reproductive process female gonad development sex differentiation multicellular organismal reproductive process female sex differentiation development of primary female sexual characteristics developmental process involved in reproduction ovulation cycle development of primary sexual characteristics reproductive structure development luteolysis regulation of cell-substrate adhesion cell-substrate adhesion negative regulation of cell-substrate adhesion cell migration involved in heart development cell migration involved in endocardial cushion formation cardiac chamber formation cardiac muscle cell myoblast differentiation cardioblast differentiation myoblast differentiation cardiac conduction system development atrioventricular node development negative regulation of gene expression negative regulation of cold-induced thermogenesis homeostatic process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis cardiac endothelial cell differentiation endocardial cell differentiation ossification regulation of ossification negative regulation of ossification biological process involved in interspecies interaction between organisms response to lipid response to other organism response to oxygen-containing compound response to external stimulus response to lipopolysaccharide response to biotic stimulus response to bacterium response to external biotic stimulus response to molecule of bacterial origin kidney epithelium development nephron tubule development renal system development distal tubule development renal tubule development nephron development kidney development nephron epithelium development positive regulation of nervous system development astrocyte differentiation regulation of astrocyte differentiation positive regulation of gliogenesis positive regulation of neurogenesis positive regulation of astrocyte differentiation positive regulation of cell development positive regulation of glial cell differentiation outflow tract morphogenesis negative regulation of neuron differentiation regulation of neuron differentiation spermatogenesis sexual reproduction male gamete generation gamete generation negative regulation of collagen metabolic process collagen biosynthetic process regulation of collagen biosynthetic process regulation of collagen metabolic process negative regulation of collagen biosynthetic process collagen metabolic process homeostasis of number of cells within a tissue anatomical structure homeostasis tissue homeostasis homeostasis of number of cells cardiac muscle cell proliferation muscle cell proliferation cardiac muscle tissue growth striated muscle cell proliferation positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of gene expression positive regulation of biosynthetic process positive regulation of macromolecule metabolic process response to decreased oxygen levels cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to stress response to hypoxia response to stress response to oxygen levels response to abiotic stimulus regulation of growth regulation of cardiac muscle tissue growth positive regulation of cardiac muscle cell proliferation regulation of organ growth regulation of heart growth regulation of cardiac muscle cell proliferation positive regulation of developmental growth positive regulation of heart growth positive regulation of organ growth positive regulation of cardiac muscle tissue growth regulation of developmental growth positive regulation of growth negative regulation of hematopoietic progenitor cell differentiation regulation of pro-B cell differentiation negative regulation of pro-B cell differentiation regulation of lymphoid progenitor cell differentiation regulation of hematopoietic progenitor cell differentiation hemopoiesis negative regulation of lymphoid progenitor cell differentiation pro-B cell differentiation lymphoid progenitor cell differentiation hematopoietic progenitor cell differentiation positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of transcription of Notch receptor target positive regulation of DNA-templated transcription positive regulation of RNA biosynthetic process trans-synaptic signaling system process nervous system process cell-cell signaling chemical synaptic transmission, postsynaptic chemical synaptic transmission synaptic signaling anterograde trans-synaptic signaling establishment of protein localization cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport establishment of localization in cell macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport negative regulation of signaling negative regulation of cellular response to growth factor stimulus negative regulation of BMP signaling pathway negative regulation of cell communication negative regulation of response to stimulus negative regulation of signal transduction negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway regulation of molecular function regulation of catalytic activity negative regulation of molecular function negative regulation of catalytic activity positive regulation of viral genome replication positive regulation of viral process viral life cycle regulation of viral life cycle regulation of viral process viral genome replication viral process regulation of viral genome replication muscle hypertrophy regulation of muscle adaptation negative regulation of muscle hypertrophy regulation of system process striated muscle hypertrophy regulation of muscle system process muscle system process regulation of muscle hypertrophy regulation of cardiac muscle hypertrophy muscle adaptation cardiac muscle hypertrophy negative regulation of cardiac muscle hypertrophy cellular response to biotic stimulus response to tumor cell cellular response to tumor cell pericardium morphogenesis embryonic morphogenesis morphogenesis of an epithelium embryo development morphogenesis of an epithelial sheet pericardium development cellular response to vascular endothelial growth factor stimulus embryonic heart tube development embryonic heart tube morphogenesis heart looping determination of bilateral symmetry epithelial tube morphogenesis embryonic organ development determination of left/right symmetry specification of symmetry embryonic organ morphogenesis determination of heart left/right asymmetry regulation of response to external stimulus negative regulation of chemotaxis taxis endothelial cell chemotaxis cell chemotaxis chemotaxis regulation of endothelial cell chemotaxis regulation of chemotaxis negative regulation of response to external stimulus negative regulation of endothelial cell chemotaxis adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains adaptive immune response T-helper 17 type immune response negative regulation of myoblast differentiation regulation of myoblast differentiation regulation of osteoblast differentiation negative regulation of osteoblast differentiation osteoblast differentiation negative regulation of extracellular matrix organization regulation of localization negative regulation of transport negative regulation of secretion regulation of secretion by cell secretion by cell negative regulation of secretion by cell regulation of extracellular matrix constituent secretion negative regulation of cellular component organization regulation of transport secretion export from cell regulation of secretion negative regulation of extracellular matrix constituent secretion extracellular matrix constituent secretion collecting duct development cell differentiation in spinal cord spinal cord development organelle assembly plasma membrane bounded cell projection assembly organelle organization cilium assembly cilium organization cell projection assembly artery development coronary artery morphogenesis artery morphogenesis cardiac left ventricle morphogenesis pulmonary valve morphogenesis pulmonary valve development cell surface receptor signaling pathway via STAT positive regulation of receptor signaling pathway via STAT positive regulation of receptor signaling pathway via JAK-STAT regulation of receptor signaling pathway via JAK-STAT regulation of receptor signaling pathway via STAT cell surface receptor signaling pathway via JAK-STAT response to muramyl dipeptide response to nitrogen compound negative regulation of biomineral tissue development regulation of biomineral tissue development biomineral tissue development apoptotic process involved in morphogenesis apoptotic process involved in development positive regulation of apoptotic process involved in morphogenesis positive regulation of programmed cell death positive regulation of apoptotic process involved in development regulation of apoptotic process involved in development positive regulation of apoptotic process venous blood vessel development venous blood vessel morphogenesis coronary vein morphogenesis animal organ regeneration connective tissue development mesangial cell development kidney vasculature development pericyte cell differentiation renal system vasculature development mesangial cell differentiation epithelial cell differentiation involved in kidney development glomerular mesangium development glomerular mesangial cell development glomerular mesangial cell differentiation glomerulus development epithelial cell development cell differentiation involved in kidney development glomerulus vasculature development neuroblast proliferation regulation of neuroblast proliferation regulation of neural precursor cell proliferation positive regulation of neural precursor cell proliferation positive regulation of neuroblast proliferation neural precursor cell proliferation small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction regulation of Ras protein signal transduction positive regulation of Ras protein signal transduction Ras protein signal transduction positive regulation of small GTPase mediated signal transduction tube formation	postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic specialization membrane postsynaptic specialization synapse membrane plasma membrane postsynaptic density membrane synaptic membrane cell periphery postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse organelle cell junction postsynaptic membrane asymmetric synapse plasma membrane region intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle endosome membrane endosome intracellular vesicle late endosome membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane late endosome vesicle organelle membrane protein-containing complex signaling receptor complex Golgi membrane Golgi apparatus acrosomal vesicle secretory granule secretory vesicle apical part of cell apical plasma membrane cell surface organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane extracellular region Schaffer collateral - CA1 synapse glutamatergic synapse cell-cell junction adherens junction anchoring junction MAML1-RBP-Jkappa- ICN1 complex nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013032	EGF-like, conserved site	Conserved Site
A	IPR022362	Neurogenic locus notch homolog protein 1	Family
A	IPR001881	EGF-like calcium-binding domain	Domain
A	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
A	IPR000742	EGF-like domain	Domain
A	IPR051355	Notch and Slit guidance protein	Family
A	IPR035993	Notch-like domain superfamily	Homologous Superfamily
A	IPR011656	Notch, NODP domain	Domain
A	IPR009030	Growth factor receptor cysteine-rich domain superfamily	Homologous Superfamily
A	IPR010660	Notch, NOD domain	Domain
A	IPR018097	EGF-like calcium-binding, conserved site	Conserved Site
A	IPR002110	Ankyrin repeat	Repeat
A	IPR008297	Notch	Family
A	IPR049883	NOTCH1, EGF-like calcium-binding domain	Domain
A	IPR000800	Notch domain	Domain
A	IPR024600	Notch, C-terminal	Domain
A	IPR000152	EGF-type aspartate/asparagine hydroxylation site	PTM

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8OR5 | pdb_00008or5

Solution NMR structure of Notch1 TMD

External Resource: Annotation

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage