8K5O

Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C]PF02276Photosynthetic reaction centre cytochrome C subunit (CytoC_RC)Photosynthetic reaction centre cytochrome C subunit- Family
B [auth L]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
C [auth M]PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
D [auth H]PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
D [auth H]PF03967Photosynthetic reaction centre, H-chain N-terminal region (PRCH)Photosynthetic reaction centre, H-chain N-terminal region- Family
D [auth H]PF05239PRC-barrel domain (PRC)PRC-barrel domainThe PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, ...The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain [1].
Domain
E [auth 4]PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
F [auth 3]PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain
PF00556Antenna complex alpha/beta subunit (LHC)Antenna complex alpha/beta subunit- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]Photosynthetic reaction center cytochrome c subunit
CB [auth 2]reaction center small polypeptide---
DB [auth 9]reactin center small polypeptide---
B [auth L]Reaction center protein L chain
C [auth M]Reaction center protein M chain
D [auth H]Photosynthetic reaction center H subunit
E [auth 4]Antenna complex alpha/beta subunit domain-containing protein
F [auth 3]Light-harvesting LHI
Antenna complex alpha/beta subunit domain-containing protein
Beta subunit of light-harvesting 1
Gamma subunit of light-harvesting 1---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C]IPR036280Multiheme cytochrome superfamilyHomologous Superfamily
A [auth C]IPR023119Multihaem cytochrome, PRC subunit superfamilyHomologous Superfamily
A [auth C]IPR003158Photosynthetic reaction centre, cytochrome c subunitFamily
B [auth L]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
B [auth L]IPR000484Photosynthetic reaction centre, L/MFamily
B [auth L]IPR005871Photosynthetic reaction centre, L subunitFamily
C [auth M]IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
C [auth M]IPR005781Photosynthetic reaction centre, M subunitFamily
C [auth M]IPR000484Photosynthetic reaction centre, L/MFamily
D [auth H]IPR014747Bacterial photosynthetic reaction centre, H-chain, C-terminalHomologous Superfamily
D [auth H]IPR015810Photosynthetic reaction centre, H subunit, N-terminalDomain
D [auth H]IPR005652Photosynthetic reaction centre, H subunitFamily
D [auth H]IPR037097Photosynthetic reaction centre, H subunit, N-terminal domain superfamilyHomologous Superfamily
D [auth H]IPR011033PRC-barrel-like superfamilyHomologous Superfamily
D [auth H]IPR027275PRC-barrel domainDomain
E [auth 4]IPR000066Antenna complex, alpha/beta subunitDomain
E [auth 4]IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
E [auth 4]IPR035889Light-harvesting complexHomologous Superfamily
E [auth 4]IPR023623Antenna complex, beta subunit, conserved siteConserved Site
E [auth 4]IPR002362Light-harvesting protein B beta chainFamily
F [auth 3]IPR000066Antenna complex, alpha/beta subunitDomain
F [auth 3]IPR018332Antenna complex, alpha subunitFamily
F [auth 3]IPR002361Antenna complex, alpha subunit conserved siteConserved Site
F [auth 3]IPR035889Light-harvesting complexHomologous Superfamily
IPR000066Antenna complex, alpha/beta subunitDomain
IPR018332Antenna complex, alpha subunitFamily
IPR002361Antenna complex, alpha subunit conserved siteConserved Site
IPR035889Light-harvesting complexHomologous Superfamily
IPR023624Antenna complex, beta domain superfamilyHomologous Superfamily
IPR035889Light-harvesting complexHomologous Superfamily
IPR002362Light-harvesting protein B beta chainFamily