8JSG

Structure of the 30S-IF3 complex from Escherichia coli


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth p]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
K [auth q]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
L [auth t]SCOP2B SuperfamilyNucleic acid-binding proteins 8106545 3000135 SCOP2B (2022-06-29)
M [auth u]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
N [auth y]SCOP2B SuperfamilyRibosomal protein S16 8106547 3000680 SCOP2B (2022-06-29)
P [auth m]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
Q [auth o]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082661 3000100 SCOP2B (2022-06-29)
R [auth r]SCOP2B SuperfamilyRibosomal protein S10 8102681 3001336 SCOP2B (2022-06-29)
S [auth s]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
B [auth 2]SCOP2B SuperfamilyRibosomal protein S21 8053090 3002159 SCOP2B (2022-06-29)
T [auth w]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052568 3000068 SCOP2B (2022-06-29)
U [auth z]SCOP2B SuperfamilyRibosomal protein S19 8103915 3000686 SCOP2B (2022-06-29)
V [auth j]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063838 3001397 SCOP2B (2022-06-29)
D [auth A]SCOP2B SuperfamilyTranslation initiation factor IF3, C-terminal domain 8035754 3001514 SCOP2B (2022-06-29)
E [auth P]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
H [auth l]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)
I [auth n]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth A]PF05198Translation initiation factor IF-3, N-terminal domain (IF3_N)Translation initiation factor IF-3, N-terminal domain- Domain
D [auth A]PF00707Translation initiation factor IF-3, C-terminal domain (IF3_C)Translation initiation factor IF-3, C-terminal domain- Domain
E [auth P]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
E [auth P]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]Small ribosomal subunit protein bS18
J [auth p]Small ribosomal subunit protein uS8
K [auth q]Small ribosomal subunit protein uS11
L [auth t]Small ribosomal subunit protein uS12
M [auth u]Small ribosomal subunit protein uS15
N [auth y]30S ribosomal protein S16
O [auth h]Small ribosomal subunit protein uS3
P [auth m]Small ribosomal subunit protein uS7
Q [auth o]Small ribosomal subunit protein uS9
R [auth r]Small ribosomal subunit protein uS10
S [auth s]Small ribosomal subunit protein uS13
B [auth 2]Small ribosomal subunit protein bS21
T [auth w]Small ribosomal subunit protein uS14
U [auth z]Small ribosomal subunit protein uS19
V [auth j]Small ribosomal subunit protein uS2
C [auth 3]Small ribosomal subunit protein bS20
D [auth A]Translation initiation factor IF-3
E [auth P]Small ribosomal subunit protein uS17
F [auth g]16S ribosomal RNA---
G [auth k]Small ribosomal subunit protein uS5
H [auth l]Small ribosomal subunit protein uS4
I [auth n]Small ribosomal subunit protein bS6, non-modified isoform

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 1]IPR001648Small ribosomal subunit protein bS18Family
A [auth 1]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
A [auth 1]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
J [auth p]IPR000630Small ribosomal subunit protein uS8Family
J [auth p]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
J [auth p]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
K [auth q]IPR001971Small ribosomal subunit protein uS11Family
K [auth q]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth q]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth q]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth t]IPR005679Ribosomal protein uS12, bacterial-typeFamily
L [auth t]IPR006032Small ribosomal subunit protein uS12Family
L [auth t]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth u]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
M [auth u]IPR000589Small ribosomal subunit protein uS15Family
M [auth u]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
N [auth y]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
N [auth y]IPR000307Small ribosomal subunit protein bS16Family
N [auth y]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
O [auth h]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
O [auth h]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
O [auth h]IPR004087K Homology domainDomain
O [auth h]IPR004044K Homology domain, type 2Domain
O [auth h]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
O [auth h]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
O [auth h]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
O [auth h]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
P [auth m]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
P [auth m]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
P [auth m]IPR000235Small ribosomal subunit protein uS7Family
P [auth m]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
P [auth m]IPR023798Small ribosomal subunit protein uS7 domainDomain
Q [auth o]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Q [auth o]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
Q [auth o]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Q [auth o]IPR000754Small ribosomal subunit protein uS9Family
Q [auth o]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
R [auth r]IPR027486Small ribosomal subunit protein uS10 domainDomain
R [auth r]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
R [auth r]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
R [auth r]IPR001848Small ribosomal subunit protein uS10Family
S [auth s]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
S [auth s]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
S [auth s]IPR001892Small ribosomal subunit protein uS13Family
S [auth s]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
S [auth s]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
B [auth 2]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
B [auth 2]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
B [auth 2]IPR001911Small ribosomal subunit protein bS21Family
T [auth w]IPR001209Small ribosomal subunit protein uS14Family
T [auth w]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
T [auth w]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
U [auth z]IPR002222Small ribosomal subunit protein uS19Family
U [auth z]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
U [auth z]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
U [auth z]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
V [auth j]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
V [auth j]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
V [auth j]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
V [auth j]IPR001865Small ribosomal subunit protein uS2Family
C [auth 3]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
C [auth 3]IPR002583Small ribosomal subunit protein bS20Family
D [auth A]IPR019815Translation initiation factor 3, C-terminalDomain
D [auth A]IPR001288Translation initiation factor 3Family
D [auth A]IPR019814Translation initiation factor 3, N-terminalDomain
D [auth A]IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyHomologous Superfamily
D [auth A]IPR036787Translation initiation factor 3 (IF-3), N-terminal domain superfamilyHomologous Superfamily
D [auth A]IPR019813Translation initiation factor 3, conserved siteConserved Site
E [auth P]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
E [auth P]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
E [auth P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth P]IPR000266Small ribosomal subunit protein uS17Family
G [auth k]IPR000851Small ribosomal subunit protein uS5Family
G [auth k]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
G [auth k]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
G [auth k]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
G [auth k]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
G [auth k]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
G [auth k]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth l]IPR002942RNA-binding S4 domainDomain
H [auth l]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
H [auth l]IPR022801Small ribosomal subunit protein uS4Family
H [auth l]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
H [auth l]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
H [auth l]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
I [auth n]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
I [auth n]IPR000529Small ribosomal subunit protein bS6Family
I [auth n]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
I [auth n]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
I [auth n]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily