8JOV | pdb_00008jov

Portal-tail complex of phage GP4

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth r]	Cullin_AB	e8jovr1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
WA [auth o]	Cullin_AB	e8jovo1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
SA [auth k]	Cullin_AB	e8jovk1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
OA [auth g]	Cullin_AB	e8jovg1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
KA [auth c]	Cullin_AB	e8jovc1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
GA [auth Y]	Cullin_AB	e8jovY1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
G [auth 6]	Cullin_AB	e8jov61	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
FB [auth x]	Cullin_AB	e8jovx1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
D [auth 3]	Cullin_AB	e8jov31	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
CB [auth u]	Cullin_AB	e8jovu1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
CA [auth U]	Cullin_AB	e8jovU1	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)
A [auth 0]	Cullin_AB	e8jov01	A: beta barrels	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: Cullin_AB	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], P [auth H], Q [auth I], QA [auth i], R [auth J], S [auth K], T [auth L], UA [auth m]	PF16510	Phage P22-like portal protein (P22_portal)	Phage P22-like portal protein	-	Family
AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], P [auth H], Q [auth I], QA [auth i], R [auth J], S [auth K], T [auth L], UA [auth m]	PF24175	SU10 adaptor protein (SU10_adaptor)	SU10 adaptor protein	-	Family
I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], N [auth F]	PF16510	Phage P22-like portal protein (P22_portal)	Phage P22-like portal protein	-	Family
I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], N [auth F]	PF24175	SU10 adaptor protein (SU10_adaptor)	SU10 adaptor protein	-	Family
BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], FA [auth X], HB [auth z], JA [auth b], NA [auth f], RA [auth j], VA [auth n], YA [auth q]	PF16510	Phage P22-like portal protein (P22_portal)	Phage P22-like portal protein	-	Family
BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], FA [auth X], HB [auth z], JA [auth b], NA [auth f], RA [auth j], VA [auth n], YA [auth q]	PF24175	SU10 adaptor protein (SU10_adaptor)	SU10 adaptor protein	-	Family
AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], GB [auth y], H [auth 7], HA [auth Z], LA [auth d], PA [auth h], TA [auth l], U [auth M], V [auth N], W [auth O], X [auth P], XA [auth p], Y [auth Q], Z [auth R]	PF16510	Phage P22-like portal protein (P22_portal)	Phage P22-like portal protein	-	Family
AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], GB [auth y], H [auth 7], HA [auth Z], LA [auth d], PA [auth h], TA [auth l], U [auth M], V [auth N], W [auth O], X [auth P], XA [auth p], Y [auth Q], Z [auth R]	PF24175	SU10 adaptor protein (SU10_adaptor)	SU10 adaptor protein	-	Family
A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], G [auth 6], GA [auth Y], KA [auth c], OA [auth g], SA [auth k], WA [auth o], ZA [auth r]	PF16510	Phage P22-like portal protein (P22_portal)	Phage P22-like portal protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], P [auth H], Q [auth I], QA [auth i], R [auth J], S [auth K], T [auth L], UA [auth m]	gp81 of phage GP4	-	-	-
I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], N [auth F]	Virion-associated phage protein	-	-	-
BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], FA [auth X], HB [auth z], JA [auth b], NA [auth f], RA [auth j], VA [auth n], YA [auth q]	Virion associated protein	-	-	-
AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], GB [auth y], H [auth 7], HA [auth Z], LA [auth d], PA [auth h], TA [auth l], U [auth M], V [auth N], W [auth O], X [auth P], XA [auth p], Y [auth Q], Z [auth R]	Putative tail fiber protein	-	-	virus tail virion component
A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], G [auth 6], GA [auth Y], KA [auth c], OA [auth g], SA [auth k], WA [auth o], ZA [auth r]	Portal protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], AA [auth S], EA [auth W], IA [auth a], MA [auth e], O [auth G], P [auth H], Q [auth I], QA [auth i], R [auth J], S [auth K], T [auth L], UA [auth m]	IPR056209	SU10 adaptor protein	Family
BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], BA [auth T], BB [auth t], C [auth 2], EB [auth w], F [auth 5], FA [auth X], HB [auth z], JA [auth b], NA [auth f], RA [auth j], VA [auth n], YA [auth q]	IPR056209	SU10 adaptor protein	Family
AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], AB [auth s], B [auth 1], DA [auth V], DB [auth v], E [auth 4], GB [auth y], H [auth 7], HA [auth Z], LA [auth d], PA [auth h], TA [auth l], U [auth M], V [auth N], W [auth O], X [auth P], XA [auth p], Y [auth Q], Z [auth R]	IPR030392	Intramolecular chaperone auto-processing domain	Domain
A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], A [auth 0], CA [auth U], CB [auth u], D [auth 3], FB [auth x], G [auth 6], GA [auth Y], KA [auth c], OA [auth g], SA [auth k], WA [auth o], ZA [auth r]	IPR032427	Phage P22-like portal protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.