8JIU | pdb_00008jiu

Cryo-EM structure of the GLP-1R/GCGR dual agonist SAR425899-bound human GCGR-Gs complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091138 3000473 SCOP2B (2022-06-29)
F [auth R]SCOP2B SuperfamilyFnI-like domain 8091140 3000979 SCOP2B (2022-06-29)
F [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091138 3000473 SCOP2B (2022-06-29)
D [auth C]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070796 3001771 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth R]Cation_effluxe8jiuR1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cation_effluxECOD (v295.2)
E [auth N]Cullin_ABe8jiuN1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
D [auth C]Cullin_ABe8jiuC1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
C [auth B]Cullin_ABe8jiuB1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Cullin_ABECOD (v295.2)
AV-sete8jiuA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: V-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
E [auth N]Heavy ChainIGHV3 -guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 SAbDab (2026-08-21)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth R]PF02793Hormone receptor domain (HRM)Hormone receptor domain- Family
F [auth R]PF000027 transmembrane receptor (Secretin family) (7tm_2)7 transmembrane receptor (Secretin family)This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognise ...This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 (Swiss:P48960); calcium-independent receptors for latrotoxin (such as Swiss:O94910), and brain-specific angiogenesis inhibitors (such as Swiss:O14514) amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins (e.g. Swiss:P83119). Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling [1].
Domain
C [auth B]PF25391G protein beta WD-40 repeat protein (WD40_Gbeta)G protein beta WD-40 repeat protein- Repeat
PF00503G-protein alpha subunit (G-alpha)G-protein alpha subunitG proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like ...G proteins couple receptors of extracellular signals to intracellular signaling pathways. The G protein alpha subunit binds guanyl nucleotide and is a weak GTPase. A set of residues that are unique to G-alpha as compared to its ancestor the Arf-like family form a ring of residues centered on the nucleotide binding site [3]. A Ggamma is found fused to an inactive Galpha in the Dictyostelium protein gbqA [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth R]Glucagon receptor
E [auth N]Nanobody 35---
D [auth C]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
C [auth B]Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
B [auth P]SAR425899---
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
F [auth R]P47871
P63092

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth P]DSN AA0195 , AA0624

:  D-serine (Ser) MOD:00202 , D-serine MOD:00891 , D-serine (Cys) MOD:00892 , 2-(L-cystein-S-yl)-D-serine MOD:01987