8JAZ

Structure of the alginate epimerase/lyase complexed with di-mannuronic acid

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF12708Pectate lyase superfamily protein (Pectate_lyase_3)Pectate lyase superfamily protein- Repeat
A, B
PF00353RTX calcium-binding nonapeptide repeat (4 copies) (HemolysinCabind)RTX calcium-binding nonapeptide repeat (4 copies)- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
mannuronan 5-epimerase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR001343RTX calcium-binding nonapeptide repeatRepeat
A, B
IPR024535Pectate lyase superfamily proteinDomain
A, B
IPR006633Carbohydrate-binding/sugar hydrolysis domainDomain
A, B
IPR006626Parallel beta-helix repeatRepeat
A, B
IPR018511Hemolysin-type calcium-binding conserved siteConserved Site
A, B
IPR011049Serralysin-like metalloprotease, C-terminalHomologous Superfamily
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
MLY Parent Component: LYS

RESID:  AA0075

PSI-MOD :  N6,N6-dimethyl-L-lysine MOD:00084