8J4I

Unveiling the Role of Human Prohibitin 2 as a Mitochondrial Calcium Channel in Parkinson's Disease

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: PDBTM

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF01145	SPFH domain / Band 7 family (Band_7)	SPFH domain / Band 7 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Prohibitin-2	binding sphingolipid binding lipid binding amide binding identical protein binding protein binding protein heterodimerization activity protein dimerization activity protein homodimerization activity transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding nuclear receptor binding DNA-binding transcription factor binding nuclear estrogen receptor binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress regulation of protein stability biological regulation regulation of biological quality protein stabilization response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus cellular process regulation of cell cycle phase transition regulation of cellular process positive regulation of biological process cell cycle phase transition exit from mitosis mitotic cell cycle cellular component organization regulation of mitotic cell cycle positive regulation of mitotic cell cycle phase transition positive regulation of exit from mitosis positive regulation of cell cycle process positive regulation of mitotic cell cycle cell cycle cellular component organization or biogenesis regulation of cell cycle positive regulation of cellular process cell cycle process regulation of biological process mitotic nuclear division regulation of cell cycle process organelle fission positive regulation of cell cycle regulation of mitotic cell cycle phase transition nuclear division organelle organization mitotic cell cycle process positive regulation of cell cycle phase transition regulation of exit from mitosis mitotic cell cycle phase transition positive regulation of DNA-binding transcription factor activity cellular biosynthetic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process positive regulation of molecular function nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process cellular metabolic process primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process regulation of molecular function regulation of gene expression biosynthetic process regulation of DNA-binding transcription factor activity metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process multicellular organismal process immune system process B cell activation cell activation lymphocyte activation leukocyte activation positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway response to biotic stimulus intracellular signal transduction cell communication immune response-activating signaling pathway positive regulation of immune response regulation of immune system process signal transduction positive regulation of immune system process innate immune response-activating signaling pathway immune response response to other organism regulation of innate immune response response to external stimulus RIG-I signaling pathway regulation of response to stimulus defense response to other organism positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response cytoplasmic pattern recognition receptor signaling pathway regulation of defense response regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus intracellular receptor signaling pathway signaling positive regulation of response to stimulus positive regulation of response to external stimulus immune response-regulating signaling pathway regulation of response to stress innate immune response response to external biotic stimulus positive regulation of innate immune response defense response defense response to symbiont chromosome organization sister chromatid cohesion response to lipid response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to retinoic acid cellular response to lipid protein localization establishment of protein localization cellular localization nitrogen compound transport nucleocytoplasmic transport transport nuclear transport intracellular transport protein localization to nucleus establishment of localization localization import into nucleus establishment of protein localization to organelle protein transport cellular macromolecule localization macromolecule localization protein localization to organelle establishment of localization in cell protein import into nucleus intracellular protein transport cell migration cell motility cell surface receptor signaling pathway CD40 signaling pathway regulation of localization regulation of catalytic activity regulation of electron transfer activity monoatomic ion transmembrane transport regulation of transmembrane transporter activity regulation of generation of precursor metabolites and energy regulation of monoatomic ion transmembrane transport regulation of transporter activity monoatomic cation transmembrane transport regulation of cytochrome-c oxidase activity monoatomic ion transport monoatomic cation transport regulation of monoatomic ion transmembrane transporter activity regulation of proton transport regulation of transport proton transmembrane transport regulation of monoatomic ion transport regulation of oxidoreductase activity generation of precursor metabolites and energy inorganic ion transmembrane transport inorganic cation transmembrane transport transmembrane transport regulation of transmembrane transport regulation of monoatomic cation transmembrane transport positive regulation of phosphorylation regulation of transferase activity positive regulation of phosphate metabolic process positive regulation of metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process phosphorus metabolic process protein modification process positive regulation of protein phosphorylation protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of kinase activity activation of protein kinase C activity regulation of kinase activity activation of protein kinase activity macromolecule modification regulation of phosphorus metabolic process regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of cellular metabolic process positive regulation of protein modification process protein metabolic process positive regulation of protein kinase activity positive regulation of transferase activity positive regulation of catalytic activity regulation of protein kinase activity regulation of phosphorylation regulation of immune effector process immunoglobulin production positive regulation of macromolecule biosynthetic process positive regulation of biosynthetic process positive regulation of immune effector process positive regulation of immunoglobulin production production of molecular mediator of immune response immune effector process regulation of immunoglobulin production positive regulation of gene expression positive regulation of production of molecular mediator of immune response regulation of production of molecular mediator of immune response positive regulation of cellular biosynthetic process hormone-mediated signaling pathway cellular response to endogenous stimulus response to hormone response to steroid hormone nuclear receptor-mediated steroid hormone signaling pathway cellular response to steroid hormone stimulus response to organic cyclic compound steroid hormone receptor signaling pathway cellular response to hormone stimulus response to endogenous stimulus cellular response to organic cyclic compound estrogen receptor signaling pathway nuclear receptor-mediated signaling pathway negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of biological process regulation of signal transduction negative regulation of cell communication negative regulation of intracellular steroid hormone receptor signaling pathway regulation of intracellular signal transduction regulation of intracellular steroid hormone receptor signaling pathway regulation of intracellular estrogen receptor signaling pathway negative regulation of cellular process negative regulation of intracellular estrogen receptor signaling pathway regulation of signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of cell communication branching involved in mammary gland duct morphogenesis development of secondary female sexual characteristics mammary gland morphogenesis reproductive process mammary gland development branching morphogenesis of an epithelial tube gland development mammary gland branching involved in thelarche developmental process involved in reproduction multicellular organism development tube morphogenesis gland morphogenesis anatomical structure development animal organ morphogenesis thelarche epithelial tube morphogenesis development of secondary sexual characteristics developmental process epithelium development tube development animal organ development morphogenesis of an epithelium tissue development mammary gland duct morphogenesis tissue morphogenesis anatomical structure morphogenesis mammary gland epithelium development morphogenesis of a branching structure morphogenesis of a branching epithelium regulation of developmental process regulation of branching involved in mammary gland duct morphogenesis regulation of morphogenesis of an epithelium regulation of multicellular organismal process regulation of anatomical structure morphogenesis regulation of morphogenesis of a branching structure regulation of animal organ morphogenesis negative regulation of cellular metabolic process negative regulation of RNA biosynthetic process negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process negative regulation of DNA-templated transcription negative regulation of metabolic process negative regulation of cellular biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process negative regulation of DNA-binding transcription factor activity negative regulation of molecular function positive regulation of cell communication positive regulation of signal transduction positive regulation of ERK1 and ERK2 cascade intracellular signaling cassette positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade MAPK cascade ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of signaling negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death negative regulation of mammary gland epithelial cell proliferation epithelial cell proliferation negative regulation of cell population proliferation cell population proliferation regulation of mammary gland epithelial cell proliferation regulation of cell population proliferation regulation of epithelial cell proliferation negative regulation of multicellular organismal process negative regulation of epithelial cell proliferation mammary gland epithelial cell proliferation phosphatidylglycerol metabolic process regulation of lipid metabolic process glycerophospholipid metabolic process phospholipid metabolic process regulation of phospholipid metabolic process cardiolipin metabolic process regulation of cardiolipin metabolic process organophosphate metabolic process cellular lipid metabolic process glycerolipid metabolic process lipid metabolic process defense response to virus antiviral innate immune response response to virus regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction positive regulation of non-canonical NF-kappaB signal transduction regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition positive regulation of cell cycle G1/S phase transition mitochondrion organization cellular catabolic process mitophagy catabolic process macroautophagy autophagy autophagy of mitochondrion process utilizing autophagic mechanism mammary gland lobule development mammary gland alveolus development	presynapse synapse cell junction cellular anatomical entity presynaptic active zone intracellular anatomical structure cytoplasm glutamatergic synapse membrane-bounded organelle mitochondrial membrane mitochondrion membrane organelle outer membrane intracellular membrane-bounded organelle presynapse synapse cell junction cellular anatomical entity presynaptic active zone intracellular anatomical structure cytoplasm glutamatergic synapse membrane-bounded organelle mitochondrial membrane mitochondrion membrane organelle outer membrane intracellular membrane-bounded organelle intracellular organelle organelle envelope bounding membrane of organelle organelle mitochondrial envelope mitochondrial outer membrane outer membrane organelle membrane axon cell projection neuron projection plasma membrane bounded cell projection organelle inner membrane mitochondrial inner membrane nucleus membrane-enclosed lumen intracellular organelle lumen organelle lumen nuclear periphery nuclear lumen nuclear matrix cell surface cell periphery plasma membrane protein-containing complex GABA-ergic synapse postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization asymmetric synapse mitochondrial protein-containing complex membrane protein complex mitochondrial prohibitin complex inner mitochondrial membrane protein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR036013	Band 7/SPFH domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR001107	Band 7 domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR000163	Prohibitin	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F	Pharos: Q99623	colorectal cancer lung cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia heart disease medulloblastoma plasma cell myeloma large cell medulloblastoma ovarian cancer

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C, D, E A, B, C, D, E, F	PDBTM	Annotated as membrane protein by PDBTM

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.