8IN8

Cryo-EM structure of the target ssDNA-bound SIR2-APAZ/Ago-gRNA quaternary complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]F_UNCLASSIFIEDe8in8C2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
B [auth C]F_UNCLASSIFIEDe8in8C1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]Sir2 superfamily protein- - -
B [auth C]Piwi domain protein - -
C [auth I]RNA (5'-R(P*AP*UP*AP*AP*UP*GP*GP*UP*UP*UP*CP*UP*UP*AP*GP*AP*CP*GP*UP*CP*GP*UP*UP*U)-3')---
D [auth J]DNA (5'-D(P*AP*AP*CP*GP*AP*CP*GP*TP*CP*TP*AP*AP*GP*AP*AP*AP*CP*CP*AP*TP*TP*AP*A)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR039444SIR2-like domainDomain
A [auth B]IPR029035DHS-like NAD/FAD-binding domain superfamilyHomologous Superfamily
B [auth C]IPR036397Ribonuclease H superfamilyHomologous Superfamily
B [auth C]IPR012337Ribonuclease H-like superfamilyHomologous Superfamily