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8I13
Cryo-EM structure of 6-subunit Smc5/6
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A [auth B]
SMC6 isoform 1
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
pyrophosphatase activity
ATP hydrolysis activity
ribonucleoside triphosphate phosphatase activity
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
hydrolase activity
hydrolase activity, acting on acid anhydrides
catalytic activity
ATP-dependent activity
DNA binding
damaged DNA binding
nucleic acid binding
single-stranded DNA binding
Less
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
macromolecule metabolic process
double-strand break repair via homologous recombination
DNA repair
Less
intracellular organelle
site of double-strand break
intracellular anatomical structure
organelle
intracellular non-membrane-bounded organelle
site of DNA damage
chromosome
cellular anatomical entity
non-membrane-bounded organelle
protein-containing complex
catalytic complex
SUMO ligase complex
transferase complex
Smc5-Smc6 complex
intracellular organelle
site of double-strand break
intracellular anatomical structure
organelle
intracellular non-membrane-bounded organelle
site of DNA damage
chromosome
cellular anatomical entity
non-membrane-bounded organelle
protein-containing complex
catalytic complex
SUMO ligase complex
transferase complex
Smc5-Smc6 complex
condensed chromosome
membrane-bounded organelle
nucleus
intracellular membrane-bounded organelle
Less
B [auth A]
Structural maintenance of chromosomes protein 5
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
organic cyclic compound binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
pyrophosphatase activity
ATP hydrolysis activity
ribonucleoside triphosphate phosphatase activity
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
hydrolase activity
hydrolase activity, acting on acid anhydrides
catalytic activity
ATP-dependent activity
DNA binding
single-stranded DNA binding
nucleic acid binding
Less
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
macromolecule metabolic process
double-strand break repair via homologous recombination
DNA repair
cell cycle
chromosome segregation
cell cycle process
Less
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
intracellular membrane-bounded organelle
Less
C
MMS21 isoform 1
aminoacyltransferase activity
ubiquitin-like protein transferase activity
SUMO ligase activity
catalytic activity, acting on a protein
acyltransferase activity
ubiquitin-like protein ligase activity
SUMO transferase activity
transferase activity
catalytic activity
cation binding
transition metal ion binding
zinc ion binding
ion binding
binding
aminoacyltransferase activity
ubiquitin-like protein transferase activity
SUMO ligase activity
catalytic activity, acting on a protein
acyltransferase activity
ubiquitin-like protein ligase activity
SUMO transferase activity
transferase activity
catalytic activity
cation binding
transition metal ion binding
zinc ion binding
ion binding
binding
metal ion binding
small molecule binding
Less
organonitrogen compound metabolic process
peptidyl-lysine modification
primary metabolic process
protein sumoylation
macromolecule modification
peptidyl-amino acid modification
metabolic process
protein metabolic process
macromolecule metabolic process
protein modification process
post-translational protein modification
protein modification by small protein conjugation
protein modification by small protein conjugation or removal
cellular response to stimulus
organonitrogen compound metabolic process
peptidyl-lysine modification
primary metabolic process
protein sumoylation
macromolecule modification
peptidyl-amino acid modification
metabolic process
protein metabolic process
macromolecule metabolic process
protein modification process
post-translational protein modification
protein modification by small protein conjugation
protein modification by small protein conjugation or removal
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
cellular process
double-strand break repair via homologous recombination
DNA repair
Less
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
intracellular membrane-bounded organelle
Less
D [auth F]
Non-structural maintenance of chromosomes element 1 homolog
aminoacyltransferase activity
ubiquitin-like protein transferase activity
catalytic activity, acting on a protein
acyltransferase activity
transferase activity
catalytic activity
ubiquitin-protein transferase activity
cation binding
ion binding
binding
metal ion binding
small molecule binding
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
cellular response to stimulus
double-strand break repair
response to stimulus
DNA recombination
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
recombinational repair
metabolic process
cellular process
macromolecule metabolic process
double-strand break repair via homologous recombination
DNA repair
Less
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
intracellular membrane-bounded organelle
Less
E [auth G]
NSE3 isoform 1
-
regulation of cellular process
cellular biosynthetic process
negative regulation of biological process
RNA metabolic process
negative regulation of cellular metabolic process
regulation of primary metabolic process
negative regulation of RNA biosynthetic process
RNA biosynthetic process
nucleobase-containing compound metabolic process
DNA-templated transcription
nucleic acid biosynthetic process
regulation of RNA metabolic process
transcription by RNA polymerase II
negative regulation of cellular process
regulation of cellular process
cellular biosynthetic process
negative regulation of biological process
RNA metabolic process
negative regulation of cellular metabolic process
regulation of primary metabolic process
negative regulation of RNA biosynthetic process
RNA biosynthetic process
nucleobase-containing compound metabolic process
DNA-templated transcription
nucleic acid biosynthetic process
regulation of RNA metabolic process
transcription by RNA polymerase II
negative regulation of cellular process
negative regulation of nucleobase-containing compound metabolic process
regulation of nucleobase-containing compound metabolic process
regulation of RNA biosynthetic process
negative regulation of macromolecule metabolic process
regulation of biosynthetic process
regulation of transcription by RNA polymerase II
negative regulation of DNA-templated transcription
regulation of biological process
negative regulation of transcription by RNA polymerase II
cellular metabolic process
negative regulation of metabolic process
biological regulation
primary metabolic process
regulation of cellular metabolic process
regulation of macromolecule metabolic process
nucleobase-containing compound biosynthetic process
gene expression
macromolecule biosynthetic process
nucleic acid metabolic process
negative regulation of cellular biosynthetic process
regulation of cellular biosynthetic process
regulation of gene expression
biosynthetic process
negative regulation of biosynthetic process
negative regulation of macromolecule biosynthetic process
metabolic process
cellular process
regulation of macromolecule biosynthetic process
macromolecule metabolic process
regulation of DNA-templated transcription
regulation of metabolic process
negative regulation of RNA metabolic process
cellular response to stimulus
response to stimulus
DNA metabolic process
cellular response to stress
DNA damage response
response to stress
DNA repair
Less
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
organelle
nucleus
intracellular membrane-bounded organelle
cellular anatomical entity
F [auth H]
Non-structural maintenance of chromosomes element 4
-
cellular response to stimulus
response to stimulus
primary metabolic process
DNA metabolic process
nucleic acid metabolic process
nucleobase-containing compound metabolic process
cellular response to stress
DNA damage response
response to stress
metabolic process
cellular process
macromolecule metabolic process
DNA repair
DNA recombination
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
protein-containing complex
intracellular anatomical structure
catalytic complex
chromosome
SUMO ligase complex
cellular anatomical entity
transferase complex
intracellular organelle
Smc5-Smc6 complex
organelle
intracellular non-membrane-bounded organelle
condensed chromosome
non-membrane-bounded organelle
membrane-bounded organelle
nucleus
intracellular membrane-bounded organelle
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A [auth B]
IPR038729
Rad50/SbcC-type AAA domain
Domain
A [auth B]
IPR027417
P-loop containing nucleoside triphosphate hydrolase
Homologous Superfamily
B [auth A]
IPR027131
Structural maintenance of chromosomes protein 5
Family
B [auth A]
IPR003395
RecF/RecN/SMC, N-terminal
Domain
B [auth A]
IPR027417
P-loop containing nucleoside triphosphate hydrolase
Homologous Superfamily
C
IPR004181
Zinc finger, MIZ-type
Domain
C
IPR013083
Zinc finger, RING/FYVE/PHD-type
Homologous Superfamily
C
IPR026846
E3 SUMO-protein ligase Nse2 (Mms21)
Family
D [auth F]
IPR011513
Non-structural maintenance of chromosomes element 1
Family
D [auth F]
IPR014857
Non-structural maintenance of chromosomes element 1, RING C4HC3-type
Domain
D [auth F]
IPR036388
Winged helix-like DNA-binding domain superfamily
Homologous Superfamily
E [auth G]
IPR041899
MAGE homology domain, winged helix WH2 motif
Homologous Superfamily
E [auth G]
IPR002190
MAGE homology domain
Domain
E [auth G]
IPR041898
MAGE homology domain, winged helix WH1 motif
Homologous Superfamily
E [auth G]
IPR037445
Melanoma-associated antigen
Family
F [auth H]
IPR027786
Nse4/EID family
Family
F [auth H]
IPR014854
Non-structural maintenance of chromosome element 4, C-terminal
Domain
F [auth H]
IPR029225
Nse4/EID protein, Nse3/MAGE-binding domain
Domain
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