Annotations: 8HWZ

Cryo-EM structure of delta N15 MsDps2 of Mycobacterium smegmatis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
H [auth K]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
J [auth H]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
I [auth F]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
F [auth G]	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8075814	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF3223	e8hwzA01	A: beta barrels	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: DUF3223	ECOD (v294.2)
C	MIF4G	e8hwzC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
D	MIF4G	e8hwzD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E	MIF4G	e8hwzE1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
G [auth I]	MIF4G	e8hwzI1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
H [auth K]	MIF4G	e8hwzK1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
J [auth H]	MIF4G	e8hwzH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
K [auth J]	MIF4G	e8hwzJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
L	MIF4G	e8hwzL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
I [auth F]	MIF4G	e8hwzF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F [auth G]	MIF4G	e8hwzG1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
B	MIF4G	e8hwzB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	PF00210	Ferritin-like domain (Ferritin)	Ferritin-like domain	This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	Starvation-inducible DNA-binding protein or fine tangled pili major subunit	DNA binding binding nucleic acid binding oxidoreductase activity, acting on metal ions oxidoreductase activity catalytic activity cation binding ferric iron binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	IPR002177	DNA-binding protein Dps	Family
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E, A, B, C, D, E, F [auth G], G [auth I], H [auth K], I [auth F], J [auth H], K [auth J], L	IPR023188	DNA-binding protein Dps, conserved site	Conserved Site

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.