Annotations: 8HRY

Cryo-EM structure of human NTCP-myr-preS1-YN9016Fab complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth L]	ABC_membrane	e8hryL01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: ABC_membrane	ECOD (v295.2)
C [auth H]	ABC_membrane	e8hryH01	A: alpha arrays	X: Rossmann-like	H: Rossmann-related	T: FAD/NAD(P)-binding domain	F: ABC_membrane	ECOD (v295.2)
A	MIF4G	e8hryA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MIF4G	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01758	Sodium Bile acid symporter family (SBF)	Sodium Bile acid symporter family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth L]	Fab light chain from antibody IgG clone number YN9016	-	-	-
C [auth H]	Fab heavy chain from antibody IgG clone number YN9016	-	-	-
B	Large S protein (Fragment)	-	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction import into cell receptor-mediated endocytosis of virus by host cell transport establishment of localization caveolin-mediated endocytosis vesicle-mediated transport localization symbiont entry into host cell caveolin-mediated endocytosis of virus by host cell symbiont entry into host cellular process endocytosis involved in viral entry into host cell receptor-mediated endocytosis endocytosis	virion component viral membrane viral envelope cellular anatomical structure membrane virion membrane
A	Sodium/bile acid cotransporter	lipid transmembrane transporter activity transporter activity carboxylic acid transmembrane transporter activity transmembrane transporter activity bile acid transmembrane transporter activity monoatomic cation transmembrane transporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity bile acid:sodium symporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity secondary active monocarboxylate transmembrane transporter activity organic acid:sodium symporter activity active transmembrane transporter activity lipid transmembrane transporter activity transporter activity carboxylic acid transmembrane transporter activity transmembrane transporter activity bile acid transmembrane transporter activity monoatomic cation transmembrane transporter activity solute:sodium symporter activity solute:monoatomic cation symporter activity bile acid:sodium symporter activity sodium ion transmembrane transporter activity secondary active transmembrane transporter activity secondary active monocarboxylate transmembrane transporter activity organic acid:sodium symporter activity active transmembrane transporter activity monoatomic ion transmembrane transporter activity metal ion transmembrane transporter activity symporter activity	cellular response to stimulus cellular response to chemical stimulus response to stimulus response to chemical cellular response to xenobiotic stimulus cellular process response to xenobiotic stimulus response to nutrient levels response to hormone response to endogenous stimulus response to estrogen carboxylic acid transport transport lipid localization cellular response to stimulus cellular response to chemical stimulus response to stimulus response to chemical cellular response to xenobiotic stimulus cellular process response to xenobiotic stimulus response to nutrient levels response to hormone response to endogenous stimulus response to estrogen carboxylic acid transport transport lipid localization bile acid and bile salt transport lipid transport organic hydroxy compound transport establishment of localization organic acid transport localization monocarboxylic acid transport macromolecule localization response to alcohol response to oxygen-containing compound response to ethanol	cell periphery cellular anatomical structure plasma membrane membrane basal part of cell basal plasma membrane plasma membrane region basolateral plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR000349	Large envelope protein S	Family
A	IPR004710	Bile acid:sodium symporter	Family
A	IPR002657	Bile acid:sodium symporter/arsenical resistance protein Acr3	Family
A	IPR038770	Sodium/solute symporter superfamily	Homologous Superfamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B	MemProtMD	Annotated as membrane protein by MemProtMD