Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNTF2-like 8034031 3000472 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyNTF2-like 8034032 3000472 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe8hbnA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: F_UNCLASSIFIEDECOD (1.6)
APF22602e8hbnA2 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF22602ECOD (1.6)
BPF10429e8hbnB1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: PF10429ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF22602Nuclear RNA export factor, NTF2 domain (NXF_NTF2)Nuclear RNA export factor, NTF2 domainThis entry represents the NTF2 domain of nuclear RNA export factors (NFX), proteins that are involved in the nuclear export of mRNAs [1-5].Domain
PF10429Nuclear pore RNA shuttling protein Mtr2 (Mtr2)Nuclear pore RNA shuttling protein Mtr2Mtr2 is a monomeric, dual-action, RNA-shuttle protein found in yeasts. Transport across the nuclear-cytoplasmic membrane is via the macro-molecular membrane-spanning nuclear pore complex, NPC. The pore is lined by a subset of NPC members called nucle ...Mtr2 is a monomeric, dual-action, RNA-shuttle protein found in yeasts. Transport across the nuclear-cytoplasmic membrane is via the macro-molecular membrane-spanning nuclear pore complex, NPC. The pore is lined by a subset of NPC members called nucleoporins that present FG (Phe-Gly) receptors, characteristically GLFG and FXFG motifs, for shuttling RNAs and proteins. RNA cargo is bound to soluble transport proteins (nuclear export factors) such as Mex67 in yeasts, and TAP in metazoa, which pass along the pore by binding to successive FG receptors. Mtr2 when bound to Mex67 maximises this FG-binding. Mtr2 also acts independently of Mex67 in transporting the large ribosomal RNA subunit through the pore [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
mRNA export factor MEX67
mRNA transport regulator MTR2-