8H1J
Cryo-EM structure of the TnpB-omegaRNA-target DNA ternary complex
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12323 | Helix-turn-helix domain (HTH_OrfB_IS605) | Helix-turn-helix domain | - | Family | |
PF01385 | Probable transposase (OrfB_IS605) | Probable transposase | - | Family | |
PF07282 | Putative transposase DNA-binding domain (OrfB_Zn_ribbon) | Putative transposase DNA-binding domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
RNA-guided DNA endonuclease TnpB | - | |||
C [auth B] | omegaRNA (130-MER) | - | - | - |
Non-target strand | - | - | - | |
B [auth C] | Target strand | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR053522 | RNA-guided DNA endonuclease TnpB-like | Family | |
IPR021027 | Transposase, putative, helix-turn-helix domain | Domain | |
IPR037278 | ARFGAP/RecO-like zinc finger | Homologous Superfamily | |
IPR051399 | RNA-guided DNA endonucleases/Transposases | Family | |
IPR010095 | Cas12f1-like, TNB domain | Domain | |
IPR001959 | Probable transposase, IS891/IS1136/IS1341 | Domain |