Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth f]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
G [auth g]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
H [auth h]SCOP2B SuperfamilyRibosomal protein S8 8079059 3000709 SCOP2B (2022-06-29)
J [auth m]SCOP2B SuperfamilyS13-like H2TH domain 8098358 3000053 SCOP2B (2022-06-29)
K [auth o]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8032375 3001284 SCOP2B (2022-06-29)
M [auth q]SCOP2B SuperfamilyNucleic acid-binding proteins 8059276 3000135 SCOP2B (2022-06-29)
D [auth d]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083400 3001473 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe8ghuA1 A: alpha arraysX: RuvA-CH: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology)T: RuvA-C, UBA, CRAL/TRIO-N, HBS1F: F_UNCLASSIFIEDECOD (1.6)
APF07091e8ghuA2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: PF07091ECOD (1.6)
C [auth c]PF00189e8ghuc1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
C [auth c]PF07650e8ghuc2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
E [auth e]PF03719e8ghue2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
E [auth e]PF00333e8ghue1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
F [auth f]PF01250e8ghuf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
G [auth g]PF00177e8ghug1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
H [auth h]PF00410e8ghuh2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
H [auth h]PF00410e8ghuh1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
I [auth l]PF00164e8ghul1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
J [auth m]PF00416e8ghum1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
K [auth o]PF00312e8ghuo1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
M [auth q]PF00366e8ghuq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
N [auth r]PF01084e8ghur1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
O [auth t]PF01649e8ghut1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
L [auth p]PF00886e8ghup1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
D [auth d]PF00163,PF01479e8ghud1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
ARO:3000861rmtCRmtC is a rRNA methyltransferase found in Proteus mirabilis with high level resistance to similar to aminoglycosides, with the exception of non-4,6-disubstituted deoxystreptamines (streptomycin and neomycin). It has also been isolated in Salmonella enterica ser. Virchow. It is hypothesized to methylate G1405, like related methyltransferases RmtA, RmtB, and ArmA.CARD (3.2.9)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
ARO:300427116S rRNA methyltransferase (G1405)aminoglycoside antibioticantibiotic target alterationCARD (3.2.9)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07091Ribosomal RNA methyltransferase (FmrO) (FmrO)Ribosomal RNA methyltransferase (FmrO)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
16S rRNA (guanine(1405)-N(7))-methyltransferase -
B [auth a]16S rRNA---
C [auth c]30S ribosomal protein S3
E [auth e]30S ribosomal protein S5
F [auth f]30S ribosomal protein S6, non-modified isoform
G [auth g]30S ribosomal protein S7
H [auth h]30S ribosomal protein S8
I [auth l]30S ribosomal protein S12
J [auth m]30S ribosomal protein S13
K [auth o]30S ribosomal protein S15
M [auth q]30S ribosomal protein S17
N [auth r]30S ribosomal protein S18
O [auth t]30S ribosomal protein S20
L [auth p]30S ribosomal protein S16
D [auth d]30S ribosomal protein S4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR025981Ribosomal RNA aminoglycoside-resistance methyltransferaseFamily
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
IPR010769Ribosomal RNA aminoglycoside-resistance methyltransferase, Gram-negative bacteriaFamily
C [auth c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth c]IPR004087K Homology domainDomain
C [auth c]IPR004044K Homology domain, type 2Domain
C [auth c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth c]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
E [auth e]IPR000851Small ribosomal subunit protein uS5Family
E [auth e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth e]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
F [auth f]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth f]IPR000529Small ribosomal subunit protein bS6Family
F [auth f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth g]IPR000235Small ribosomal subunit protein uS7Family
G [auth g]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth g]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth h]IPR000630Small ribosomal subunit protein uS8Family
H [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
I [auth l]IPR005679Ribosomal protein uS12, bacterial-typeFamily
I [auth l]IPR006032Small ribosomal subunit protein uS12Family
I [auth l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
J [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
J [auth m]IPR001892Small ribosomal subunit protein uS13Family
J [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
J [auth m]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
K [auth o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
K [auth o]IPR000589Small ribosomal subunit protein uS15Family
K [auth o]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
M [auth q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
M [auth q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
M [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth q]IPR000266Small ribosomal subunit protein uS17Family
N [auth r]IPR001648Small ribosomal subunit protein bS18Family
N [auth r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
N [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
O [auth t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
O [auth t]IPR002583Small ribosomal subunit protein bS20Family
L [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
L [auth p]IPR000307Small ribosomal subunit protein bS16Family
L [auth p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
D [auth d]IPR002942RNA-binding S4 domainDomain
D [auth d]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth d]IPR022801Small ribosomal subunit protein uS4Family
D [auth d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily