8FWE

Neck structure of Agrobacterium phage Milano, C3 symmetry

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], BB [auth A], C [auth L], CA [auth l], CB [auth B], D [auth M], DA [auth m], DB [auth C], E [auth N], EA [auth n], EB [auth D], F [auth O], FA [auth o], FB [auth E], G [auth P], GA [auth p], GB [auth F], H [auth Q], HA [auth q], HB [auth G], I [auth R], IA [auth r], J [auth S], JA [auth s], K [auth T], KA [auth t], L [auth U], LA [auth u], M [auth V], MA [auth v], N [auth W], NA [auth w], O [auth X], OA [auth x], P [auth Y], PA [auth y], Q [auth Z], QA [auth z], R [auth a], RA [auth 1], S [auth b], SA [auth 2], T [auth c], TA [auth 3], U [auth d], UA [auth 4], V [auth e], VA [auth 5], W [auth f], WA [auth 6], X [auth g], XA [auth 7], Y [auth h], YA [auth 8], Z [auth i], ZA [auth 9]	PF17963	Bacterial Ig domain (Big_9)	Bacterial Ig domain	This entry represents a wide variety of bacterial Ig domains.	Domain
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	PF04860	Phage portal protein (Phage_portal)	Phage portal protein	-	Family
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	PF17963	Bacterial Ig domain (Big_9)	Bacterial Ig domain	This entry represents a wide variety of bacterial Ig domains.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], A [auth J], AA [auth j], AB [auth 0], B [auth K], BA [auth k], BB [auth A], C [auth L], CA [auth l], CB [auth B], D [auth M], DA [auth m], DB [auth C], E [auth N], EA [auth n], EB [auth D], F [auth O], FA [auth o], FB [auth E], G [auth P], GA [auth p], GB [auth F], H [auth Q], HA [auth q], HB [auth G], I [auth R], IA [auth r], J [auth S], JA [auth s], K [auth T], KA [auth t], L [auth U], LA [auth u], M [auth V], MA [auth v], N [auth W], NA [auth w], O [auth X], OA [auth x], P [auth Y], PA [auth y], Q [auth Z], QA [auth z], R [auth a], RA [auth 1], S [auth b], SA [auth 2], T [auth c], TA [auth 3], U [auth d], UA [auth 4], V [auth e], VA [auth 5], W [auth f], WA [auth 6], X [auth g], XA [auth 7], Y [auth h], YA [auth 8], Z [auth i], ZA [auth 9]	Collar sheath protein, gp13	-	-	-
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	Portal protein, gp7	-	biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle biological process involved in interaction with host biological process involved in symbiotic interaction	-
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	Neck 2 protein, gp15	-	-	-
FC [auth AS], HC [auth AT], PC [auth AW], RC [auth AX], VB [auth AQ], FC [auth AS], HC [auth AT], PC [auth AW], RC [auth AX], VB [auth AQ], XB [auth AR]	Tail-terminator protein, gp18	-	-	-
GC [auth AV], JC [auth Aa], QC [auth AY], TC [auth Ab], WB [auth AU], GC [auth AV], JC [auth Aa], QC [auth AY], TC [auth Ab], WB [auth AU], ZB [auth AZ]	Tail-tube, gp21	-	-	-
AC [auth R3], BC [auth S3], CC [auth T3], DC [auth U3], KC [auth R4], AC [auth R3], BC [auth S3], CC [auth T3], DC [auth U3], KC [auth R4], LC [auth S4], MC [auth T4], NC [auth U4], UC [auth R5], VC [auth S5], WC [auth T5], XC [auth U5]	Neck 1 protein, gp14	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], IB [auth AA], JB [auth AB], KB [auth AC], LB [auth AD], MB [auth AE], NB [auth AF], OB [auth AG], PB [auth AH], QB [auth AI], RB [auth AJ], SB [auth AK], TB [auth AL]	IPR006944	Bacteriophage/Gene transfer agent portal protein	Family
EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], EC [auth AN], IC [auth H], OC [auth AO], SC [auth I], UB [auth AM], YB [auth AP]	IPR038666	Bacteriophage SPP1, head-tail adaptor superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.