8FQC
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth E1], S [auth a1], U [auth f1], V [auth g1] | PF07157 | DNA circularisation protein N-terminus (DNA_circ_N) | DNA circularisation protein N-terminus | - | Family |
C [auth F1], D [auth G1], W [auth h1], X [auth i1] | PF04865 | Baseplate J-like protein (Baseplate_J) | Baseplate J-like protein | - | Family |
E [auth H1], Y [auth j1] | PF04865 | Baseplate J-like protein (Baseplate_J) | Baseplate J-like protein | - | Family |
BA [auth m1], F [auth I1], H [auth K1], Z [auth k1] | PF04865 | Baseplate J-like protein (Baseplate_J) | Baseplate J-like protein | - | Family |
N [auth U1], T [auth e1] | PF07157 | DNA circularisation protein N-terminus (DNA_circ_N) | DNA circularisation protein N-terminus | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth C1] | Baseplate hub protein, gp26 | - | - | - |
B [auth E1], S [auth a1], U [auth f1], V [auth g1] | Tail-tube, gp21 | - | - | - |
C [auth F1], D [auth G1], W [auth h1], X [auth i1] | Baseplate Wedge 2 protein, gp29 | - | - | - |
E [auth H1], Y [auth j1] | Baseplate wedge 1, gp28 | - | - | - |
BA [auth m1], F [auth I1], H [auth K1], Z [auth k1] | Tail sheath protein, gp20 | - | - | - |
AA [auth l1], G [auth J1] | Baseplate Wedge 3 protein, gp30 | - | - | - |
Tail Spike protein, gp124 | - | |||
Short Tail Fibers, gp31 | - | - | - | |
N [auth U1], T [auth e1] | Baseplate Centerpiece, gp25 | - | - | - |
LA [auth A] | Baseplate Central Spike, gp27 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth F1], D [auth G1], W [auth h1], X [auth i1] | IPR006949 | Baseplate protein J-like | Domain |
IPR012334 | Pectin lyase fold | Homologous Superfamily | |
IPR011050 | Pectin lyase fold/virulence factor | Homologous Superfamily | |
N [auth U1], T [auth e1] | IPR009826 | DNA circulation, N-terminal | Domain |