8FE4
Structure of dengue virus (DENV2) in complex with prM13, an anti-PrM monoclonal antibody
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flavi_glycop_C | e8fe4A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
A | Flavi_glycoprot | e8fe4A1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
E [auth C] | Flavi_glycop_C | e8fe4C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
E [auth C] | Flavi_glycoprot | e8fe4C2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
I [auth E] | Flavi_glycop_C | e8fe4E2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
I [auth E] | Flavi_glycoprot | e8fe4E1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
C [auth H] | V-set_8 | e8fe4H2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
C [auth H] | C1-set_1 | e8fe4H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
G [auth M] | V-set_8 | e8fe4M1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
G [auth M] | C1-set_1 | e8fe4M2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
K [auth O] | V-set_8 | e8fe4O2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
K [auth O] | C1-set_1 | e8fe4O1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
D [auth L] | C1-set_4 | e8fe4L2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
D [auth L] | V-set | e8fe4L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
H [auth N] | C1-set_4 | e8fe4N1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
H [auth N] | V-set | e8fe4N2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
L [auth P] | C1-set_4 | e8fe4P1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_4 | ECOD (1.6) |
L [auth P] | V-set | e8fe4P2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (1.6) |
B | Flavi_propep | e8fe4B1 | A: beta sandwiches | X: HSP40/DnaJ peptide-binding domain (From Topology) | H: HSP40/DnaJ peptide-binding domain (From Topology) | T: HSP40/DnaJ peptide-binding domain | F: Flavi_propep | ECOD (1.6) |
F [auth D] | Flavi_propep | e8fe4D1 | A: beta sandwiches | X: HSP40/DnaJ peptide-binding domain (From Topology) | H: HSP40/DnaJ peptide-binding domain (From Topology) | T: HSP40/DnaJ peptide-binding domain | F: Flavi_propep | ECOD (1.6) |
J [auth F] | Flavi_propep | e8fe4F1 | A: beta sandwiches | X: HSP40/DnaJ peptide-binding domain (From Topology) | H: HSP40/DnaJ peptide-binding domain (From Topology) | T: HSP40/DnaJ peptide-binding domain | F: Flavi_propep | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H], G [auth M], K [auth O] | Heavy Chain | IGHV1 | - | prm protein | SAbDab (2024-09-27) |
D [auth L], H [auth N], L [auth P] | Light Chain | IGKV4 | Kappa | prm protein | SAbDab (2024-09-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth C], I [auth E] | PF00869 | Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot) | Flavivirus glycoprotein, central and dimerisation domains | - | Domain |
A, E [auth C], I [auth E] | PF02832 | Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C) | Flavivirus glycoprotein, immunoglobulin-like domain | - | Domain |
B, F [auth D], J [auth F] | PF01570 | Flavivirus polyprotein propeptide (Flavi_propep) | Flavivirus polyprotein propeptide | - | Family |