8F0U
Structure of a 12mer DegP cage bound to the client protein hTRF1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Trypsin_2 | e8f0uA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_2 | ECOD (1.6) |
A | PDZ_2 | e8f0uA1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
B [auth D] | PDZ_2 | e8f0uD1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
C [auth a] | Myb_DNA-binding | e8f0ua1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Myb_DNA-binding | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00249 | Myb-like DNA-binding domain (Myb_DNA-binding) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain | |
PF13365 | Trypsin-like peptidase domain (Trypsin_2) | Trypsin-like peptidase domain | This family includes trypsin-like peptidase domains. | Domain | |
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain | |
B [auth D] | PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR001940 | Peptidase S1C | Family | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR011782 | Peptidase S1C, Do | Family | |
IPR001478 | PDZ domain | Domain | |
B [auth D] | IPR009003 | Peptidase S1, PA clan | Homologous Superfamily |
B [auth D] | IPR001940 | Peptidase S1C | Family |
B [auth D] | IPR036034 | PDZ superfamily | Homologous Superfamily |
B [auth D] | IPR011782 | Peptidase S1C, Do | Family |
B [auth D] | IPR001478 | PDZ domain | Domain |
C [auth a] | IPR017930 | Myb domain | Domain |
C [auth a] | IPR052450 | Telomeric Repeat-Binding Domain-Containing Protein | Family |
C [auth a] | IPR013867 | Telomere repeat-binding factor, dimerisation domain | Domain |
C [auth a] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
C [auth a] | IPR036507 | Telomere repeat-binding factor, dimerisation domain superfamily | Homologous Superfamily |
C [auth a] | IPR017357 | Telomeric repeat-binding factor 1/2 | Family |
C [auth a] | IPR001005 | SANT/Myb domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
C [auth a] | P54274 | :