8EUU
Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | gp120 core | 8080371 | 3001390 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Virus ectodomain | 8085614 | 3001628 | SCOP2B (2022-06-29) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV1 | - | envelope glycoprotein gp41 | envelope glycoprotein gp120 | SAbDab (2024-08-23) | |
Light Chain | IGKV1 | Kappa | envelope glycoprotein gp41 | envelope glycoprotein gp120 | SAbDab (2024-08-23) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00516 | Envelope glycoprotein GP120 (GP120) | Envelope glycoprotein GP120 | - | Family | |
PF00517 | Retroviral envelope protein (GP41) | Retroviral envelope protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000777 | Human immunodeficiency virus 1, envelope glycoprotein Gp120 | Domain | |
IPR036377 | Gp120 core superfamily | Homologous Superfamily | |
IPR000328 | Retroviral envelope protein GP41-like | Domain | |
IPR037527 | Envelope glycoprotein Gp160 | Family | |
IPR000777 | Human immunodeficiency virus 1, envelope glycoprotein Gp120 | Domain | |
IPR036377 | Gp120 core superfamily | Homologous Superfamily | |
IPR000328 | Retroviral envelope protein GP41-like | Domain | |
IPR037527 | Envelope glycoprotein Gp160 | Family |