Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth 4]F_UNCLASSIFIEDe8eti41 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: F_UNCLASSIFIEDECOD (1.6)
I [auth C]Ribosomal_L4e8etiC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
I [auth C]Ribos_L4_asso_Ce8etiC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
L [auth F]Ribosomal_L30_1e8etiF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
N [auth H]Ribosomal_L6_2e8etiH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
N [auth H]Ribosomal_L6e8etiH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
P [auth K]Ribosomal_L1_2nde8etiK1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2ndECOD (1.6)
P [auth K]Ribosomal_L1_1st_2e8etiK2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_2ECOD (1.6)
T [auth O]Ribosomal_L13e8etiO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
U [auth P]Ribosomal_L22e8etiP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
CA [auth d]Ribosomal_L31ee8etid1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
DA [auth e]Ribosomal_L32ee8etie1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
EA [auth f]Ribosomal_L35Aee8etif1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
FA [auth h]Ribosomal_L29_2e8etih1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
HA [auth j]Ribosomal_L37ee8etij1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
QA [auth y]eIF-6e8etiy1 A: a+b duplicates or obligate multimersX: Pentein (From Topology)H: Pentein (From Topology)T: PenteinF: eIF-6ECOD (1.6)
J [auth D]F_UNCLASSIFIEDe8etiD2 A: alpha duplicates or obligate multimersX: RNA helicase Hera dimerization domain (From Topology)H: RNA helicase Hera dimerization domain (From Topology)T: RNA helicase Hera dimerization domainF: F_UNCLASSIFIEDECOD (1.6)
J [auth D]DEADe8etiD3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEADECOD (1.6)
J [auth D]Helicase_C_1e8etiD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_1ECOD (1.6)
K [auth E]Ribosomal_L6ee8etiE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
M [auth G]Ribosomal_L7Ae_1e8etiG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
Q [auth L]Ribosomal_L13ee8etiL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
R [auth M]Ribosomal_L14ee8etiM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
S [auth N]Ribosomal_L15ee8etiN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
V [auth Q]Ribosomal_L18e8etiQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
W [auth S]Ribosomal_L18Ae8etiS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
X [auth V]Ribosomal_L14e8etiV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth W]Ribosomal_L10e8etiW1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
Y [auth W]Ribosomal_P0_L10ee8etiW2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
Z [auth X]Ribosomal_L23_3e8etiX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
AA [auth Y]Ribosomal_L26e8etiY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
GA [auth i]Ribosomal_L36ee8etii1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
MA [auth t]Ribosomal_L30_1e8etit1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
NA [auth u]Ribosomal_L24ee8etiu1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
E [auth 5]ANAPC4_WD40_7e8eti51 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_7ECOD (1.6)
H [auth B]DUF452,Ribosomal_L3e8etiB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: DUF452,Ribosomal_L3ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth 3]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
C [auth 3]PF04874Mak16 protein C-terminal region (Mak16)Mak16 protein C-terminal region- Family
I [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
I [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
L [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
L [auth F]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
N [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
N [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
P [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
T [auth O]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.
Domain
T [auth O]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
U [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
J [auth D]PF13959Domain of unknown function (DUF4217) (DUF4217)Domain of unknown function (DUF4217)This short domain is found at the C-terminus of many helicase proteins.Domain
J [auth D]PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
J [auth D]PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
J [auth D]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
K [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
K [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
M [auth G]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth J]PF05890Eukaryotic rRNA processing protein EBP2 (Ebp2)Eukaryotic rRNA processing protein EBP2- Family
R [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
R [auth M]PF00467KOW motif (KOW)KOW motif- Family
S [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
S [auth N]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
W [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
X [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
X [auth V]PF09420Ribosome biogenesis protein Nop16 (Nop16)Ribosome biogenesis protein Nop16- Family
Y [auth W]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
Z [auth X]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
Z [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Z [auth X]PF04427Brix domain (Brix)Brix domain- Domain
AA [auth Y]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
AA [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth Y]PF00467KOW motif (KOW)KOW motif- Family
SA [auth T]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
G [auth A]PF04427Brix domain (Brix)Brix domain- Domain
H [auth B]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
H [auth B]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth 2]RNA (152-MER)---
C [auth 3]Protein mak16-
D [auth 4]Ribosomal RNA-processing protein 1 homolog-
I [auth C]60S ribosomal protein L4-B
L [auth F]60S ribosomal protein L7-B
N [auth H]60S ribosomal protein L9-A
P [auth K]Putative ribosome biogenesis protein C8F11.04
T [auth O]60S ribosomal protein L16-B
U [auth P]60S ribosomal protein L17-A
CA [auth d]60S ribosomal protein L31
DA [auth e]60S ribosomal protein L32-A
EA [auth f]60S ribosomal protein L33-B
FA [auth h]60S ribosomal protein L35
HA [auth j]60S ribosomal protein L37-B
IA [auth m]Ribosome biogenesis protein erb1
KA [auth o]Uncharacterized RNA-binding protein C1827.05c
OA [auth v]Nucleolar protein 16-
QA [auth y]Eukaryotic translation initiation factor 6
A [auth 1]RNA (1564-MER)---
J [auth D]ATP-dependent RNA helicase has1
K [auth E]60S ribosomal protein L6
M [auth G]60S ribosomal protein L8
O [auth J]Probable rRNA-processing protein ebp2-
Q [auth L]60S ribosomal protein L13
R [auth M]60S ribosomal protein L14
S [auth N]60S ribosomal protein L15-A
V [auth Q]60S ribosomal protein L18-A
W [auth S]60S ribosomal protein L20-A
X [auth V]60S ribosomal protein L23-A
Y [auth W]Ribosome assembly factor mrt4-
Z [auth X]60S ribosomal protein L25-A
AA [auth Y]60S ribosomal protein L26
BA [auth b]Probable nucleolar GTP-binding protein 1
GA [auth i]60S ribosomal protein L36-B
JA [auth n]Pescadillo homolog
LA [auth r]Ribosome biogenesis protein nsa2-
MA [auth t]60S ribosomal protein L7-A
NA [auth u]Ribosome biogenesis protein rlp24-
PA [auth x]Brix domain-containing protein C4F8.04
RA [auth z]UPF0642 protein C32H8.05-
SA [auth T]60S ribosomal protein L21-A
E [auth 5]Ribosome biogenesis protein nsa1-
F [auth 6]RNA (125-MER)---
G [auth A]Ribosome biogenesis protein brx1
H [auth B]60S ribosomal protein L3-A

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth 3]IPR006958Mak16 proteinFamily
C [auth 3]IPR029004Ribosomal eL28/Mak16Domain
D [auth 4]IPR010301Ribosomal RNA processing protein 1Family
I [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
I [auth C]IPR002136Large ribosomal subunit protein uL4Family
I [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
I [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
I [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
L [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
L [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
L [auth F]IPR039699Large ribosomal subunit protein uL30Family
L [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
L [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
L [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
N [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
N [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
N [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
N [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
P [auth K]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
P [auth K]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
P [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
P [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
T [auth O]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
T [auth O]IPR005822Large ribosomal subunit protein uL13Family
T [auth O]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth O]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
U [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
U [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
U [auth P]IPR001063Large ribosomal subunit protein uL22Family
U [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
CA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth d]IPR000054Large ribosomal subunit protein eL31Family
DA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth e]IPR001515Large ribosomal subunit protein eL32Family
DA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
EA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth f]IPR001780Large ribosomal subunit protein eL33Family
EA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
FA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
FA [auth h]IPR001854Large ribosomal subunit protein uL29Family
FA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
FA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
HA [auth j]IPR001569Large ribosomal subunit protein eL37Family
HA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
HA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth m]IPR019775WD40 repeat, conserved siteConserved Site
IA [auth m]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IA [auth m]IPR028598WD repeat BOP1/Erb1Family
IA [auth m]IPR001680WD40 repeatRepeat
IA [auth m]IPR012953BOP1, N-terminal domainDomain
IA [auth m]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
KA [auth o]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
KA [auth o]IPR000504RNA recognition motif domainDomain
KA [auth o]IPR035979RNA-binding domain superfamilyHomologous Superfamily
OA [auth v]IPR019002Ribosome biogenesis protein Nop16Family
QA [auth y]IPR002769Translation initiation factor IF6Family
J [auth D]IPR001650Helicase, C-terminal domain-likeDomain
J [auth D]IPR000629ATP-dependent RNA helicase DEAD-box, conserved siteConserved Site
J [auth D]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
J [auth D]IPR044773DDX18/Has1, DEAD-box helicase domainDomain
J [auth D]IPR014014RNA helicase, DEAD-box type, Q motifDomain
J [auth D]IPR025313ATP-dependent rRNA helicase SPB4-like, C-terminal extensionDomain
J [auth D]IPR011545DEAD/DEAH box helicase domainDomain
J [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
K [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
K [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
K [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth E]IPR000915Large ribosomal subunit protein eL6Family
M [auth G]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
M [auth G]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
M [auth G]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
M [auth G]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
M [auth G]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
M [auth G]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
O [auth J]IPR008610Eukaryotic rRNA processingFamily
Q [auth L]IPR001380Large ribosomal subunit protein eL13Family
Q [auth L]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
R [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
R [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R [auth M]IPR039660Large ribosomal subunit protein eL14Family
R [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
R [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
R [auth M]IPR005824KOWDomain
S [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
S [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
S [auth N]IPR000439Large ribosomal subunit protein eL15Family
V [auth Q]IPR021131Large ribosomal subunit protein uL15/eL18Domain
V [auth Q]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
V [auth Q]IPR000039Large ribosomal subunit protein eL18Family
V [auth Q]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth S]IPR028877Large ribosomal subunit protein eL20Family
W [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
W [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
X [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth V]IPR000218Large ribosomal subunit protein uL14Family
X [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
Y [auth W]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
Y [auth W]IPR001790Large ribosomal subunit protein uL10Family
Y [auth W]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
Y [auth W]IPR051742Ribosomal Assembly Factor uL10Family
Y [auth W]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
Y [auth W]IPR033867Ribosome assembly factor Mrt4Family
Z [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
AA [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth Y]IPR005824KOWDomain
AA [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth b]IPR024926Nucleolar GTP-binding protein 1Family
BA [auth b]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
BA [auth b]IPR012973NOG, C-terminalDomain
BA [auth b]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
BA [auth b]IPR041623NOG1, N-terminal helical domainDomain
BA [auth b]IPR006073GTP binding domainDomain
BA [auth b]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
GA [auth i]IPR000509Large ribosomal subunit protein eL36Family
GA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
JA [auth n]IPR010613PescadilloFamily
JA [auth n]IPR001357BRCT domainDomain
JA [auth n]IPR036420BRCT domain superfamilyHomologous Superfamily
LA [auth r]IPR039411Ribosomal biogenesis NSA2 familyFamily
LA [auth r]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
MA [auth t]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
MA [auth t]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
MA [auth t]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
MA [auth t]IPR039699Large ribosomal subunit protein uL30Family
MA [auth t]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
MA [auth t]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
MA [auth t]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
NA [auth u]IPR011017TRASH domainDomain
NA [auth u]IPR000988Large ribosomal subunit protein eL24-relatedFamily
NA [auth u]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
NA [auth u]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
PA [auth x]IPR044281U3 snoRNP protein/Ribosome production factor 1Family
PA [auth x]IPR007109Brix domainDomain
RA [auth z]IPR019434Domain of unknown function DUF2423Domain
SA [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
SA [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
SA [auth T]IPR001147Large ribosomal subunit protein eL21Family
SA [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth 5]IPR001680WD40 repeatRepeat
E [auth 5]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
E [auth 5]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
E [auth 5]IPR037379WDR74/Nsa1Family
G [auth A]IPR026532Ribosome biogenesis protein BRX1Family
G [auth A]IPR007109Brix domainDomain
H [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
H [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
H [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
H [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
H [auth B]IPR000597Large ribosomal subunit protein uL3Family