Annotations: 8EA3

V-K CAST Transpososome from Scytonema hofmanni, major configuration

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
R [auth S]	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8032375	3001284	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z	Ferritin	e8ea3Z1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
Y	Ferritin	e8ea3Y1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
X	Ferritin	e8ea3X1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
W	Ferritin	e8ea3W1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
V [auth z]	Ferritin	e8ea3z1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
U [auth y]	Ferritin	e8ea3y1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
T [auth x]	Ferritin	e8ea3x1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
S [auth w]	Ferritin	e8ea3w1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ferritin	ECOD (v295.2)
R [auth S]	MCM_OB	e8ea3S1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
O [auth L]	MCM_OB	e8ea3L1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
N [auth K]	MCM_OB	e8ea3K1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
M [auth J]	MCM_OB	e8ea3J1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
L [auth I]	MCM_OB	e8ea3I1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
K [auth H]	MCM_OB	e8ea3H1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
J [auth G]	MCM_OB	e8ea3G1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
I [auth F]	MCM_OB	e8ea3F1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
H [auth E]	MCM_OB	e8ea3E1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
G [auth D]	MCM_OB	e8ea3D1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
F [auth C]	MCM_OB	e8ea3C1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
E [auth B]	MCM_OB	e8ea3B1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)
D [auth A]	MCM_OB	e8ea3A1	A: alpha arrays	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: MCM_OB	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
K [auth H]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
J [auth G]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)
G [auth D]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
R [auth S]	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth 2]	LE_R	-	-	-
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	TnsB	binding nucleic acid binding	nucleobase-containing compound metabolic process metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process DNA integration nucleic acid metabolic process	-
R [auth S]	30S ribosomal protein S15	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cytosolic small ribosomal subunit protein-containing complex small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome
Q	TniQ	-	-	-
P [auth O]	Cas12k	-	-	-
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L]	TnsC	identical protein binding protein binding binding	-	-
C [auth 7]	sg_RNA	-	-	-
B [auth 3]	Non-target_R	-	-	-
DA [auth 6]	RE_R2	-	-	-
CA [auth 5]	RE_R1	-	-	-
BA [auth 4]	RE_F	-	-	-
A [auth 1]	Target_LE	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR036397	Ribonuclease H superfamily	Homologous Superfamily
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR009057	Homeodomain-like superfamily	Homologous Superfamily
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR009004	Transposase, Mu, C-terminal	Homologous Superfamily
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR001584	Integrase, catalytic core	Domain
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR063619	TnsB-like, C-terminal domain	Domain
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR012337	Ribonuclease H-like superfamily	Homologous Superfamily
S [auth w], T [auth x], U [auth y], V [auth z], W, S [auth w], T [auth x], U [auth y], V [auth z], W, X, Y, Z	IPR015378	Transposase-like, Mu, C-terminal	Domain
R [auth S]	IPR005290	Small ribosomal subunit protein uS15, bacteria	Family
R [auth S]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
R [auth S]	IPR000589	Small ribosomal subunit protein uS15	Family
Q	IPR009492	TniQ	Domain
P [auth O]	IPR049868	Type V CRISPR-associated protein Cas12k	Family
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L]	IPR052026	ExeA_AAA_ATPase_DNA-bind	Unknown
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L]	IPR008868	Bacterial TniB	Family
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily