8E70
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth e] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
B [auth e] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
B [auth e] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
C [auth f] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
C [auth f] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
C [auth f] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
D [auth c] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
D [auth c] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
D [auth c] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
E [auth b] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
E [auth b] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
E [auth b] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
F [auth a] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
F [auth a] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
F [auth a] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
G [auth d] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8057374 | 3000135 | SCOP2B (2022-06-29) |
G [auth d] | SCOP2B Superfamily | Rho N-terminal domain-like | 8057372 | 3001774 | SCOP2B (2022-06-29) |
G [auth d] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8057376 | 3002019 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth e] | Rho_RNA_bind | e8e70e2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
B [auth e] | Rho_N | e8e70e1 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
B [auth e] | ATP-synt_ab | e8e70e3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
C [auth f] | Rho_RNA_bind | e8e70f1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
C [auth f] | Rho_N | e8e70f2 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
C [auth f] | ATP-synt_ab | e8e70f3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
D [auth c] | Rho_RNA_bind | e8e70c2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
D [auth c] | Rho_N | e8e70c3 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
D [auth c] | ATP-synt_ab | e8e70c1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
E [auth b] | Rho_RNA_bind | e8e70b3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
E [auth b] | Rho_N | e8e70b1 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
E [auth b] | ATP-synt_ab | e8e70b2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
F [auth a] | Rho_RNA_bind | e8e70a2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
F [auth a] | Rho_N | e8e70a1 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
F [auth a] | ATP-synt_ab | e8e70a3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
G [auth d] | Rho_RNA_bind | e8e70d2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Rho_RNA_bind | ECOD (1.6) |
G [auth d] | Rho_N | e8e70d3 | A: alpha arrays | X: LEM/SAP HeH motif-like | H: LEM/SAP HeH motif | T: LEM/SAP HeH motif | F: Rho_N | ECOD (1.6) |
G [auth d] | ATP-synt_ab | e8e70d1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011129 | Cold-shock domain | Domain | |
IPR004665 | Transcription termination factor Rho | Family | |
IPR011112 | Rho termination factor, N-terminal | Domain | |
IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR036269 | Rho termination factor, N-terminal domain superfamily | Homologous Superfamily | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR011113 | Rho termination factor, RNA-binding domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR041703 | Transcription termination factor Rho, ATP binding domain | Domain |