Structure of M. kandleri topoisomerase V in complex with DNA. 38 base pair symmetric DNA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039249 | 3000163 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039248 | 3000163 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039247 | 3000163 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Topoisomerase V catalytic domain-like | 8039252 | 3001992 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039251 | 3000163 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Topoisomerase V catalytic domain-like | 8039252 | 3001992 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039248 | 3000163 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039251 | 3000163 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039247 | 3000163 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8039249 | 3000163 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | PHF5 | e8df7B2 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PHF5 | ECOD (v294.1) |
| A | PHF5 | e8df7A2 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PHF5 | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| C [auth U], D [auth V] | DNA (39-MER) | - | - | - |
| Topoisomerase V |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR049334 | Topoisomerase V, second (HhH)2 tandem domain | Domain | |
| IPR010994 | RuvA domain 2-like | Homologous Superfamily | |
| IPR024065 | DNA topoisomerase V, catalytic domain superfamily | Homologous Superfamily | |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
| IPR055246 | Topoisomerase V, HHH domain | Domain | |
| IPR003583 | Helix-hairpin-helix DNA-binding motif, class 1 | Domain | |
| IPR054066 | SAM domain-like | Domain |














