8DEJ

D. vulgaris type I-C Cascade bound to dsDNA target


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACas_Cas5d_1e8dejA1 A: a+b two layersX: Alpha-beta plaitsH: CRISPR system Cas5 homologs (From Topology)T: CRISPR system Cas5 homologsF: Cas_Cas5d_1ECOD (1.6)
BF_UNCLASSIFIEDe8dejB1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8dejC1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
DF_UNCLASSIFIEDe8dejD1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
EF_UNCLASSIFIEDe8dejE1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
FF_UNCLASSIFIEDe8dejF1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
GF_UNCLASSIFIEDe8dejG1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)
HF_UNCLASSIFIEDe8dejH1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09704CRISPR-associated protein (Cas_Cas5) (Cas_Cas5d)CRISPR-associated protein (Cas_Cas5)- Family
B, C, D, E, F
PF05107CRISPR-associated protein Cas7 (Cas_Cas7)CRISPR-associated protein Cas7- Family
PF09709CRISPR-associated protein (Cas_Csd1) (Cas_Csd1)CRISPR-associated protein (Cas_Csd1)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
pre-crRNA processing endonuclease -
B, C, D, E, F
CRISPR-associated protein, TM1801 family- -
CRISPR-associated protein, CT1133 family- - -
J, K
CRISPR-associated protein, CT1133 family- - -
RNA (47-MER)---
DNA (40-MER)---
DNA (48-MER)---