8DCO

Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:42

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AdTDP_sugar_isome8dcoA1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: dTDP_sugar_isomECOD (1.6)
BdTDP_sugar_isome8dcoB1 A: beta sandwichesX: jelly-rollH: Double-stranded beta-helix (From Topology)T: Double-stranded beta-helixF: dTDP_sugar_isomECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00908dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP_sugar_isom)dTDP-4-dehydrorhamnose 3,5-epimeraseThis family catalyse the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000888dTDP-4-dehydrorhamnose 3,5-epimerase-likeFamily
A, B
IPR011051RmlC-like cupin domain superfamilyHomologous Superfamily
A, B
IPR014710RmlC-like jelly roll foldHomologous Superfamily