8D82
Cryo-EM structure of human IL-6 signaling complex in detergent: model containing full extracellular domains
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054843 | 3000071 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Fibronectin type III | 8055539 | 3002063 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Fibronectin type III | 8055153 | 3002063 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054843 | 3000071 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Fibronectin type III | 8055153 | 3002063 | SCOP2B (2022-06-29) |
D [auth G] | SCOP2B Superfamily | Fibronectin type III | 8055539 | 3002063 | SCOP2B (2022-06-29) |
B [auth D] | SCOP2B Superfamily | 4-helical cytokines | 8037068 | 3001717 | SCOP2B (2022-06-29) |
E [auth H] | SCOP2B Superfamily | 4-helical cytokines | 8037068 | 3001717 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Fibronectin type III | 8055145 | 3002063 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Fibronectin type III | 8055533 | 3002063 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Fibronectin type III | 8055145 | 3002063 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Fibronectin type III | 8055533 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | F_UNCLASSIFIED | e8d82C3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth G] | F_UNCLASSIFIED | e8d82G2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth D] | F_UNCLASSIFIED | e8d82D1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth H] | F_UNCLASSIFIED | e8d82H1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: 4-helical cytokines (From Topology) | T: 4-helical cytokines | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth A] | F_UNCLASSIFIED | e8d82A4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth E] | F_UNCLASSIFIED | e8d82E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], D [auth G] | PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain |
A [auth C], D [auth G] | PF00047 | Immunoglobulin domain (ig) | Immunoglobulin domain | Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prot ... | Domain |
C [auth A], F [auth E] | PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |
C [auth A], F [auth E] | PF09240 | Interleukin-6 receptor alpha chain, binding (IL6Ra-bind) | Interleukin-6 receptor alpha chain, binding | Members of this family adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 [1]. | Domain |
C [auth A], F [auth E] | PF06328 | Ig-like C2-type domain (Lep_receptor_Ig) | Ig-like C2-type domain | This domain is a ligand-binding immunoglobulin-like domain [1]. The two cysteine residues form a disulphide bridge. | Domain |