8CXB
Human PA28-20S (PA28-4a3b)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
L [auth H] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064074 | 3000131 | SCOP2B (2022-06-29) |
Z [auth V] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064074 | 3000131 | SCOP2B (2022-06-29) |
CA [auth Y] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079492 | 3000131 | SCOP2B (2022-06-29) |
O [auth K] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079492 | 3000131 | SCOP2B (2022-06-29) |
R [auth N] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079175 | 3000131 | SCOP2B (2022-06-29) |
FA [auth b] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079175 | 3000131 | SCOP2B (2022-06-29) |
E [auth A] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064014 | 3000131 | SCOP2B (2022-06-29) |
S [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064014 | 3000131 | SCOP2B (2022-06-29) |
F [auth B] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064036 | 3000131 | SCOP2B (2022-06-29) |
T [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064036 | 3000131 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064004 | 3000131 | SCOP2B (2022-06-29) |
U [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064004 | 3000131 | SCOP2B (2022-06-29) |
H [auth D] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064022 | 3000131 | SCOP2B (2022-06-29) |
V [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064022 | 3000131 | SCOP2B (2022-06-29) |
I [auth E] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064060 | 3000131 | SCOP2B (2022-06-29) |
W [auth S] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064060 | 3000131 | SCOP2B (2022-06-29) |
J [auth F] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064054 | 3000131 | SCOP2B (2022-06-29) |
X [auth T] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064054 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth c] | PF02251,PF02252 | e8cxbc1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
C [auth e] | PF02251,PF02252 | e8cxbe1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
IA [auth g] | PF02251,PF02252 | e8cxbg1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
L [auth H] | PF00227,PF12465 | e8cxbH1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
Z [auth V] | PF00227,PF12465 | e8cxbV1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
AA [auth W] | PF00227 | e8cxbW1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
M [auth I] | PF00227 | e8cxbI1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
BA [auth X] | PF00227 | e8cxbX1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
N [auth J] | PF00227 | e8cxbJ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
CA [auth Y] | PF00227 | e8cxbY1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
O [auth K] | PF00227 | e8cxbK1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
DA [auth Z] | PF00227 | e8cxbZ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
P [auth L] | PF00227 | e8cxbL1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
EA [auth a] | PF00227 | e8cxba1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Q [auth M] | PF00227 | e8cxbM1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
R [auth N] | PF00227 | e8cxbN1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
FA [auth b] | PF00227 | e8cxbb1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
B [auth d] | PF02251,PF02252 | e8cxbd1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
D [auth f] | PF02251,PF02252 | e8cxbf1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
GA [auth h] | PF02251,PF02252 | e8cxbh1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
HA [auth i] | PF02251,PF02252 | e8cxbi1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PF02251,PF02252 | ECOD (1.6) |
E [auth A] | PF00227,PF10584 | e8cxbA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
S [auth O] | PF00227,PF10584 | e8cxbO1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
F [auth B] | PF00227,PF10584 | e8cxbB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
T [auth P] | PF00227,PF10584 | e8cxbP1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
G [auth C] | PF00227,PF10584 | e8cxbC1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
U [auth Q] | PF00227,PF10584 | e8cxbQ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
H [auth D] | PF00227,PF10584 | e8cxbD1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
V [auth R] | PF00227,PF10584 | e8cxbR1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
I [auth E] | PF00227,PF10584 | e8cxbE1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
W [auth S] | PF00227,PF10584 | e8cxbS1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
J [auth F] | PF00227,PF10584 | e8cxbF1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
X [auth T] | PF00227,PF10584 | e8cxbT1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
K [auth G] | PF00227,PF10584 | e8cxbG1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Y [auth U] | PF00227,PF10584 | e8cxbU1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
L [auth H], Z [auth V] | PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family |
L [auth H], Z [auth V] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
L [auth H], Z [auth V] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
AA [auth W], M [auth I] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
AA [auth W], M [auth I] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
AA [auth W], M [auth I] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
BA [auth X], N [auth J] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
DA [auth Z], P [auth L] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
EA [auth a], Q [auth M] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
E [auth A], S [auth O] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
E [auth A], S [auth O] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
F [auth B], T [auth P] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
F [auth B], T [auth P] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
G [auth C], U [auth Q] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
G [auth C], U [auth Q] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
G [auth C], U [auth Q] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
G [auth C], U [auth Q] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
H [auth D], V [auth R] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
H [auth D], V [auth R] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
H [auth D], V [auth R] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
H [auth D], V [auth R] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
I [auth E], W [auth S] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
I [auth E], W [auth S] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
I [auth E], W [auth S] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
I [auth E], W [auth S] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
J [auth F], X [auth T] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
J [auth F], X [auth T] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
J [auth F], X [auth T] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
J [auth F], X [auth T] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
K [auth G], Y [auth U] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
K [auth G], Y [auth U] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
K [auth G], Y [auth U] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
K [auth G], Y [auth U] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |