8CWT
Complex structure of WhiB3 and the SigmaAr4-RNAP Beta flap tip chimera in space group P43212
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E | PF02467 | e8cwtE1 | A: alpha arrays | X: 4Fe-4S binding domain in Dna2 | H: 4Fe-4S protein WhiB1 (From Topology) | T: 4Fe-4S protein WhiB1 | F: PF02467 | ECOD (1.6) |
A | PF02467 | e8cwtA1 | A: alpha arrays | X: 4Fe-4S binding domain in Dna2 | H: 4Fe-4S protein WhiB1 (From Topology) | T: 4Fe-4S protein WhiB1 | F: PF02467 | ECOD (1.6) |
C | PF02467 | e8cwtC1 | A: alpha arrays | X: 4Fe-4S binding domain in Dna2 | H: 4Fe-4S protein WhiB1 (From Topology) | T: 4Fe-4S protein WhiB1 | F: PF02467 | ECOD (1.6) |
B | PF04545 | e8cwtB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04545 | ECOD (1.6) |
D | PF04545 | e8cwtD1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04545 | ECOD (1.6) |
F | PF04545 | e8cwtF1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF04545 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02467 | Transcription factor WhiB (Whib) | Transcription factor WhiB | - | Family | |
PF04545 | Sigma-70, region 4 (Sigma70_r4) | Sigma-70, region 4 | Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif [1]. Due to the way Pfam works, the threshold has been set artificially high to prevent overlaps with other helix-turn-helix fami ... | Domain |