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8CG3
Structure of TDP-43 amyloid filament from type A FTLD-TDP (variant 1)
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
TAR DNA-binding protein 43
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
organic cyclic compound binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular condensate scaffold activity
protein-macromolecule adaptor activity
DNA binding
sequence-specific DNA binding
binding
double-stranded DNA binding
nucleic acid binding
RNA polymerase II transcription regulatory region sequence-specific DNA binding
cis-regulatory region sequence-specific DNA binding
sequence-specific double-stranded DNA binding
transcription cis-regulatory region binding
organic cyclic compound binding
transcription regulatory region nucleic acid binding
RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular condensate scaffold activity
protein-macromolecule adaptor activity
molecular adaptor activity
mRNA 3'-UTR binding
RNA binding
mRNA binding
lipid binding
pre-mRNA binding
pre-mRNA intronic binding
identical protein binding
protein binding
Less
viral gene expression
biological process involved in interspecies interaction between organisms
negative regulation by host of viral transcription
modulation by host of symbiont process
viral process
biological process involved in interaction with symbiont
viral transcription
biological process involved in symbiotic interaction
membrane organization
cellular component organization
nucleus organization
organelle organization
nuclear envelope organization
nuclear inner membrane organization
viral gene expression
biological process involved in interspecies interaction between organisms
negative regulation by host of viral transcription
modulation by host of symbiont process
viral process
biological process involved in interaction with symbiont
viral transcription
biological process involved in symbiotic interaction
membrane organization
cellular component organization
nucleus organization
organelle organization
nuclear envelope organization
nuclear inner membrane organization
cellular process
cellular component organization or biogenesis
endomembrane system organization
nuclear membrane organization
rhythmic process
regulation of biological process
circadian rhythm
biological regulation
regulation of circadian rhythm
organonitrogen compound metabolic process
metabolic process
primary metabolic process
protein metabolic process
macromolecule metabolic process
supramolecular fiber organization
amyloid fibril formation
regulation of biosynthetic process
regulation of cellular process
cellular biosynthetic process
cellular metabolic process
regulation of cellular metabolic process
regulation of macromolecule metabolic process
gene expression
macromolecule biosynthetic process
regulation of cellular biosynthetic process
regulation of gene expression
biosynthetic process
regulation of macromolecule biosynthetic process
regulation of metabolic process
regulation of protein modification process
regulation of protein phosphorylation
negative regulation of biological process
negative regulation of phosphate metabolic process
negative regulation of cellular metabolic process
regulation of primary metabolic process
regulation of phosphate metabolic process
phosphate-containing compound metabolic process
negative regulation of protein modification process
negative regulation of cellular process
protein modification process
phosphorus metabolic process
negative regulation of protein metabolic process
negative regulation of macromolecule metabolic process
protein phosphorylation
phosphorylation
regulation of protein metabolic process
negative regulation of metabolic process
negative regulation of protein phosphorylation
macromolecule modification
negative regulation of phosphorus metabolic process
regulation of phosphorylation
regulation of phosphorus metabolic process
negative regulation of phosphorylation
regulation of apoptotic process
apoptotic process
regulation of programmed cell death
cell death
programmed cell death
3'-UTR-mediated mRNA destabilization
nucleobase-containing compound metabolic process
positive regulation of metabolic process
post-transcriptional regulation of gene expression
regulation of RNA metabolic process
positive regulation of macromolecule metabolic process
regulation of nucleobase-containing compound metabolic process
regulation of biological quality
RNA catabolic process
mRNA catabolic process
positive regulation of nucleobase-containing compound metabolic process
positive regulation of mRNA metabolic process
negative regulation of cellular biosynthetic process
nucleobase-containing compound catabolic process
positive regulation of RNA metabolic process
negative regulation of gene expression
negative regulation of macromolecule biosynthetic process
nucleic acid catabolic process
catabolic process
positive regulation of biological process
RNA metabolic process
mRNA destabilization
macromolecule catabolic process
regulation of mRNA catabolic process
RNA destabilization
regulation of catabolic process
mRNA metabolic process
nucleic acid metabolic process
positive regulation of catabolic process
regulation of mRNA stability
positive regulation of mRNA catabolic process
negative regulation of biosynthetic process
regulation of RNA stability
regulation of mRNA metabolic process
nucleobase-containing compound biosynthetic process
mRNA processing
RNA biosynthetic process
nucleic acid biosynthetic process
RNA processing
protein localization
regulation of localization
cellular localization
establishment of protein localization
nitrogen compound transport
regulation of protein localization
nucleocytoplasmic transport
transport
positive regulation of nucleocytoplasmic transport
nuclear transport
positive regulation of establishment of protein localization
regulation of protein localization to nucleus
positive regulation of protein transport
localization
import into nucleus
regulation of protein import into nucleus
cellular macromolecule localization
establishment of localization in cell
protein import into nucleus
positive regulation of intracellular transport
positive regulation of cellular process
regulation of intracellular transport
regulation of transport
positive regulation of protein localization to nucleus
regulation of establishment of protein localization
positive regulation of protein import into nucleus
intracellular transport
regulation of nucleocytoplasmic transport
protein localization to nucleus
regulation of protein transport
establishment of localization
positive regulation of transport
establishment of protein localization to organelle
regulation of cellular localization
protein transport
macromolecule localization
protein localization to organelle
positive regulation of protein localization
regulation of intracellular protein transport
positive regulation of intracellular protein transport
intracellular protein transport
RNA splicing
regulation of protein stability
cell cycle
regulation of cell cycle
positive regulation of macromolecule biosynthetic process
negative regulation of nucleobase-containing compound metabolic process
mRNA stabilization
negative regulation of RNA metabolic process
positive regulation of cellular metabolic process
negative regulation of mRNA metabolic process
3'-UTR-mediated mRNA stabilization
positive regulation of biosynthetic process
negative regulation of catabolic process
negative regulation of mRNA catabolic process
negative regulation of RNA catabolic process
RNA stabilization
positive regulation of gene expression
positive regulation of cellular biosynthetic process
positive regulation of cell communication
cell communication
positive regulation of insulin secretion
regulation of peptide hormone secretion
regulation of hormone levels
positive regulation of peptide hormone secretion
establishment of protein localization to extracellular region
protein secretion
regulation of protein secretion
regulation of secretion
regulation of hormone secretion
regulation of peptide secretion
signaling
positive regulation of secretion by cell
hormone secretion
protein localization to extracellular region
peptide secretion
secretion by cell
regulation of secretion by cell
positive regulation of hormone secretion
positive regulation of secretion
amide transport
signal release
positive regulation of peptide secretion
regulation of signaling
secretion
regulation of peptide transport
cell-cell signaling
export from cell
positive regulation of protein secretion
peptide transport
regulation of insulin secretion
peptide hormone secretion
hormone transport
regulation of cell communication
insulin secretion
positive regulation of signaling
cellular response to stimulus
cellular response to stress
response to stimulus
response to stress
response to endoplasmic reticulum stress
Less
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
cellular anatomical entity
intracellular membrane-bounded organelle
protein-containing complex
protein-DNA complex
nucleus
membrane-enclosed lumen
perichromatin fibrils
nuclear chromosome
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
cellular anatomical entity
intracellular membrane-bounded organelle
protein-containing complex
protein-DNA complex
nucleus
membrane-enclosed lumen
perichromatin fibrils
nuclear chromosome
chromosome
chromatin
intracellular organelle lumen
organelle lumen
intracellular non-membrane-bounded organelle
nuclear lumen
non-membrane-bounded organelle
cytoplasmic ribonucleoprotein granule
ribonucleoprotein granule
supramolecular complex
cytoplasmic stress granule
nuclear speck
nuclear body
nucleoplasm
interchromatin granule
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
IPR000504
RNA recognition motif domain
Domain
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
IPR049124
TAR DNA-binding protein 43, C-terminal
Domain
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
IPR041105
TAR DNA-binding protein 43, N-terminal
Domain
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
IPR012677
Nucleotide-binding alpha-beta plait domain superfamily
Homologous Superfamily
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
IPR035979
RNA-binding domain superfamily
Homologous Superfamily
Pharos: Disease Associations
Pharos Homepage Annotation
Chains
Drug Target  
Associated Disease
A [auth U]
,
B [auth A]
,
C [auth B]
,
D [auth C]
,
E [auth D]
Pharos
: 
Q13148
amyotrophic lateral sclerosis
amyotrophic lateral sclerosis type 10
Frontotemporal Lobar Degeneration
neurodegenerative disease
intellectual disability
Pick disease
acute myeloid leukemia
androgenetic alopecia
brain disease
diabetes mellitus
frontotemporal dementia with motor neuron disease
juvenile dermatomyositis
osteosarcoma
plasma cell myeloma
aphasia
amyotrophic lateral sclerosis
amyotrophic lateral sclerosis type 10
Frontotemporal Lobar Degeneration
neurodegenerative disease
intellectual disability
Pick disease
acute myeloid leukemia
androgenetic alopecia
brain disease
diabetes mellitus
frontotemporal dementia with motor neuron disease
juvenile dermatomyositis
osteosarcoma
plasma cell myeloma
aphasia
dementia
Ewing sarcoma
lung carcinoma
ovarian cancer
astrocytic tumor
dermatomyositis
frontotemporal dementia
Less
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