Annotations: 8C7D

Structure of the GEF Kalirin DH2 Domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e8c7dA01	A: beta barrels	X: Fe-binding domain in prismane-like proteins	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F:	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00621	RhoGEF domain (RhoGEF)	RhoGEF domain	Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases Also called Dbl-homologous (DH) domain. It appears that Pfam:PF00169 domains invariably occur C-terminal to RhoGEF/DH domains.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Kalirin	catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity protein serine kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity GTPase regulator activity enzyme regulator activity guanyl-nucleotide exchange factor activity nucleoside-triphosphatase regulator activity molecular function regulator activity cation binding metal ion binding	cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular process signal transduction enzyme-linked receptor protein signaling pathway ephrin receptor signaling pathway protein phosphorylation cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular process signal transduction enzyme-linked receptor protein signaling pathway ephrin receptor signaling pathway protein phosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process multicellular organismal process axonogenesis cellular developmental process cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization neurogenesis multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation anatomical structure development cellular component organization or biogenesis system development developmental process plasma membrane bounded cell projection organization axon guidance nervous system development axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron projection guidance neuron development regulation of signaling small GTPase-mediated signal transduction regulation of small GTPase mediated signal transduction regulation of signal transduction intracellular signal transduction regulation of intracellular signal transduction regulation of response to stimulus intracellular signaling cassette regulation of cell communication localization transport establishment of localization vesicle-mediated transport	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton cytoplasm cytosol membrane extrinsic component of membrane nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017441	Protein kinase, ATP binding site	Binding Site
A	IPR001251	CRAL-TRIO lipid binding domain	Domain
A	IPR001849	Pleckstrin homology domain	Domain
A	IPR003598	Immunoglobulin subtype 2	Domain
A	IPR036865	CRAL-TRIO lipid binding domain superfamily	Homologous Superfamily
A	IPR028570	Kalirin/Triple functional domain protein, SH3 domain 1	Domain
A	IPR000219	Dbl homology domain	Domain
A	IPR047054	Kalirin/Triple functional domain protein, pleckstrin homology (PH) domain 1	Domain
A	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A	IPR000719	Protein kinase domain	Domain
A	IPR011993	PH-like domain superfamily	Homologous Superfamily
A	IPR003599	Immunoglobulin domain subtype	Domain
A	IPR013098	Immunoglobulin I-set	Domain
A	IPR051336	Rho GTPase-activating Guanine Nucleotide Exchange Factors	Family
A	IPR047053	Kalirin/Triple functional domain protein, SH3 domain 2	Domain
A	IPR003961	Fibronectin type III	Domain
A	IPR058918	Kalirin/TRIO-like, spectrin repeats	Domain
A	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A	IPR001452	SH3 domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR035899	Dbl homology (DH) domain superfamily	Homologous Superfamily
A	IPR018159	Spectrin/alpha-actinin	Repeat
A	IPR007110	Immunoglobulin-like domain	Domain
A	IPR055251	SOS1/NGEF-like, PH domain	Domain
A	IPR008271	Serine/threonine-protein kinase, active site	Active Site
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily
A	IPR002017	Spectrin repeat	Repeat

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: O60229	marginal zone lymphoma myopathy pancreatic ductal adenocarcinoma pilocytic astrocytoma astrocytic tumor spina bifida carpal tunnel syndrome Coronary heart disease diffuse large B-cell lymphoma heart disease malignant ependymoma medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm pituitary cancer marginal zone lymphoma myopathy pancreatic ductal adenocarcinoma pilocytic astrocytoma astrocytic tumor spina bifida carpal tunnel syndrome Coronary heart disease diffuse large B-cell lymphoma heart disease malignant ependymoma medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm pituitary cancer atypical teratoid rhabdoid tumor systemic lupus erythematosus colorectal cancer coronary heart disease, susceptibility to, 5 Down syndrome large cell medulloblastoma malignant glioma malignant pancreatic neoplasm myocardial infarction osteosarcoma Pick disease primitive neuroectodermal tumor breast cancer coronary artery disease cystic fibrosis glioblastoma major depressive disorder malignant mesothelioma